Pre_GI: BLASTN Hits

Some Help

Query: NC_007347:1215358 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1215358, End: 1239350, Length: 23993

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010682:37450003745000376509920100Ralstonia pickettii 12J chromosome 1, complete sequence4e-76293BLASTN svgBLASTP svg
NC_014153:436082*43608245651520434Thiomonas intermedia K12 chromosome, complete genome4e-67264BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence1e-60242BLASTN svgBLASTP svg
NC_015138:3160764*3160764318411723354Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-58234BLASTN svgBLASTP svg
NC_012559:76893976893979733928401Laribacter hongkongensis HLHK9, complete genome1e-36163BLASTN svgBLASTP svg
NC_007947:577315*57731559793020616Methylobacillus flagellatus KT, complete genome3e-34155BLASTN svgBLASTP svg
NC_007298:2689731*2689731272716337433Dechloromonas aromatica RCB, complete genome6e-32147BLASTN svgBLASTP svg
NC_004129:5204500*5204500522581521316Pseudomonas fluorescens Pf-5, complete genome2e-31145BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-30141BLASTN svgBLASTP svg
NC_010524:34456413445641346854022900Leptothrix cholodnii SP-6, complete genome4e-30141BLASTN svgBLASTP svg
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome4e-27131BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome4e-27131BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_003296:14199921419992144318623195Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-18101BLASTN svgBLASTP svg
NC_013192:1886337*1886337191224425908Leptotrichia buccalis DSM 1135, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014910:29308602930860295129320434Alicycliphilus denitrificans BC chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009075:15017150174611331097Burkholderia pseudomallei 668 chromosome II, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014623:47887684788768481298824221Stigmatella aurantiaca DW4/3-1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002939:47406*474068127533870Geobacter sulfurreducens PCA, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013592:3618248*3618248363709918852Dickeya dadantii Ech586, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008095:40324124032412405086618455Myxococcus xanthus DK 1622, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007493:207932*20793223466126730Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0869.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010676:30440530440532659922195Burkholderia phytofirmans PsJN chromosome 2, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_015499:1403447*1403447142823724791Thermodesulfobium narugense DSM 14796 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015259:2757081*2757081278813031050Polymorphum gilvum SL003B-26A1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014152:1*13408834088Thermincola sp. JR, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014958:843456*84345686943725982Deinococcus maricopensis DSM 21211 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg