Pre_GI: BLASTP Hits

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Query: NC_007347:3612918:3635779 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3635779, End: 3637893, Length: 2115

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006350:3957454:3977437397743739795242088Burkholderia pseudomallei K96243 chromosome 1, complete sequenceATP-dependent DNA helicase Rep01088
NC_009076:3876733:3891166389116638932532088Burkholderia pseudomallei 1106a chromosome I, complete sequenceATP-dependent DNA helicase Rep01088
NC_009074:3791232:3815754381575438178412088Burkholderia pseudomallei 668 chromosome I, complete sequenceATP-dependent DNA helicase Rep01088
NC_007434:111607:1258451258451280462202Burkholderia pseudomallei 1710b chromosome I, complete sequenceATP-dependent DNA helicase Rep01088
NC_007651:3719191:3719191371919137217372547Burkholderia thailandensis E264 chromosome I, complete sequenceATP-dependent DNA helicase Rep01083
NC_009256:176403:1774401774401795272088Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUvrD/REP helicase01080
NC_008060:3155133:3199939319993932020262088Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceUvrD/REP helicase01079
NC_008767:1363288:1380391138039113824632073Neisseria meningitidis FAM18, complete genomeATP-dependent DNA helicase0658
NC_011035:933269:9352999352999373142016Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative ATP-dependent DNA helicase0655
NC_017511:852260:8522608522608542752016Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative ATP-dependent DNA helicase0655
NC_008781:330919:3478083478083499372130Polaromonas naphthalenivorans CJ2, complete genomeUvrD/REP helicase3e-175615
NC_011901:625712:6616286616286636432016Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent DNA helicase Rep1e-168593
NC_012668:442601:4725634725634745782016Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase Rep1e-163577
NC_006155:172313:1935641935641955852022Yersinia pseudotuberculosis IP 32953, complete genomeATP-dependent DNA helicase Rep6e-163575
NC_010634:166900:1881581881581901792022Yersinia pseudotuberculosis PB1/+, complete genomeATP-dependent DNA helicase Rep1e-162573
NC_007912:231817:2322972322972343152019Saccharophagus degradans 2-40, complete genomeATP-dependent DNA helicase Rep1e-161570
NC_018868:2867500:2882650288265028846712022Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeATP-dependent DNA helicase Rep7e-159561
NC_007963:3553678:3568340356834035703882049Chromohalobacter salexigens DSM 3043, complete genomeATP-dependent DNA helicase Rep2e-149530
NC_020209:4549563:4571685457168545736942010Pseudomonas poae RE*1-1-14, complete genomeATP-dependent DNA helicase Rep6e-148525
NC_018080:6048516:6099658609965861016672010Pseudomonas aeruginosa DK2 chromosome, complete genomeATP-dependent DNA helicase Rep3e-146519
NC_020829:5382500:5399636539963654016452010Pseudomonas denitrificans ATCC 13867, complete genomeATP-dependent DNA helicase Rep4e-145515
NC_003919:5056650:5056650505665050586261977Xanthomonas axonopodis pv. citri str. 306, complete genomeATP-dependent DNA helicase4e-130465
NC_002488:2546495:2556133255613325581752043Xylella fastidiosa 9a5c, complete genomeATP-dependent DNA helicase8e-128458
NC_014829:443500:4665374665374688192283Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-117423
NC_018515:3169973:3177608317760831798482241Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent DNA helicase PcrA9e-116418
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA1e-113410
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA9e-111401
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA2e-110400
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase2e-110400
NC_015573:1671000:1688552168855216907562205Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-109397
NC_014363:1680578:1680578168057816832172640Olsenella uli DSM 7084 chromosome, complete genomeUvrD/REP helicase3e-109396
NC_021171:358456:3625633625633647762214Bacillus sp. 1NLA3E, complete genomeATP-dependent DNA helicase3e-109396
NC_007929:1397989:1403083140308314053172235Lactobacillus salivarius subsp. salivarius UCC118, complete genomeATP-dependent DNA helicase2e-108394
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA6e-108392
NC_014614:656000:6578816578816600432163Clostridium sticklandii, complete genomeATP-dependent DNA helicase1e-107391
NC_010741:107370:1097471097471117201974Treponema pallidum subsp. pallidum SS14, complete genomeRep helicase, single-stranded DNA-dependent ATPase1e-107390
NC_000919:107373:1097501097501117231974Treponema pallidum subsp. pallidum str. Nichols, complete genomerep helicase, single-stranded DNA-dependent ATPase (rep)1e-107390
NC_016844:107382:1097591097591117321974Treponema pallidum subsp. pallidum DAL-1 chromosome, completeUvrD/REP family ATP-dependent DNA helicase1e-107390
NC_017268:107387:1097641097641117371974Treponema pallidum subsp. pallidum str. Chicago chromosome,ATP-dependent helicase PcrA1e-107390
NC_021508:107384:1097611097611117341974Treponema pallidum subsp. pallidum SS14, complete genomeUvrD/REP family ATP-dependent DNA helicase1e-107390
NC_017347:2017097:2027227202722720294192193Staphylococcus aureus subsp. aureus T0131 chromosome, completeATP-dependent DNA helicase, PcrA4e-107389
NC_010655:1160384:1160384116038411623902007Akkermansia muciniphila ATCC BAA-835, complete genomeUvrD/REP helicase3e-106386
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase7e-106385
NC_017200:345502:3455023455023477512250Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ATP-dependent DNA helicase PcrA6e-106385
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA1e-105384
NC_016779:312500:3133533133533156142262Bacillus cereus F837/76 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-105383
NC_008262:2433979:2461165246116524634202256Clostridium perfringens SM101, complete genomeATP-dependent DNA helicase PcrA3e-105383
NC_009012:3354477:3399024339902434012492226Clostridium thermocellum ATCC 27405, complete genomeATP-dependent DNA helicase PcrA1e-103377
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase2e-102374
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA4e-102372
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase8e-102371
NC_013525:1953920:1968327196832719706662340Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeUvrD/REP helicase1e-101371
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase2e-101370
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD4e-101369
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA1e-100367
NC_012416:979484:9824839824839843991917Wolbachia sp. wRi, complete genomeDNA helicase II1e-99364
NC_009483:1551040:1564229156422915662652037Geobacter uraniireducens Rf4 chromosome, complete genomeUvrD/REP helicase6e-99362
NC_002978:918000:9223779223779242931917Wolbachia endosymbiont of Drosophila melanogaster, complete genomehelicase II - UvrD/PcrA1e-98361
NC_014924:3065430:3065430306543030676102181Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA helicase II9e-99361
NC_002488:45219:4680546805489912187Xylella fastidiosa 9a5c, complete genomeDNA helicase II2e-98360
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase5e-98359
NC_010981:1053533:1058198105819810601111914Wolbachia pipientis, complete genomehelicase II, UvrD7e-98358
NC_009615:1067603:1087220108722010895622343Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase2e-97357
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase3e-97357
NC_010513:44886:4643546435486062172Xylella fastidiosa M12 chromosome, complete genomeDNA-dependent helicase II4e-97356
NC_006833:806467:8171338171338190491917Wolbachia endosymbiont strain TRS of Brugia malayi, completeSuperfamily I DNA and RNA helicase, UvrD1e-96355
NC_006347:2899653:2906221290622129085812361Bacteroides fragilis YCH46, complete genomeATP-dependent DNA helicase7e-97355
NC_016776:2956444:2997159299715929995192361Bacteroides fragilis 638R, complete genomeputative helicase6e-97355
NC_003228:2973266:2979834297983429821942361Bacteroides fragilis NCTC 9343, complete genomeputative helicase6e-97355
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-96354
NC_008570:236500:2417872417872439582172Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA helicase II3e-96353
NC_018419:226000:2279972279972301502154Secondary endosymbiont of Ctenarytaina eucalypti chromosome,ATP-dependent DNA helicase UvrD5e-96352
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase4e-96352
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II4e-96352
NC_018720:1186058:1186058118605811885712514Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-95350
NC_015696:610000:6267886267886290162229Francisella sp. TX077308 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-95350
NC_007205:1:1382913829158652037Candidatus Pelagibacter ubique HTCC1062, complete genomeDNA helicase II2e-95350
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II2e-95350
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II2e-95350
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II2e-95350
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II2e-95350
NC_010545:619346:6399726399726430403069Corynebacterium urealyticum DSM 7109, complete genomeputative ATP-dependent DNA helicase II4e-95349
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase6e-95348
NC_013204:1135397:1155067115506711575082442Eggerthella lenta DSM 2243, complete genomeUvrD/REP helicase3e-93343
NC_009488:1871912:1899064189906419012142151Orientia tsutsugamushi str. Boryong, complete genomeDNA helicase II, CAI276901e-92341
NC_017062:547317:5481925481925501561965Rickettsia typhi str. B9991CWPP chromosome, complete genomeDNA helicase II5e-92339
NC_014550:615609:6289646289646313422379Arthrobacter arilaitensis Re117, complete genomeATP-dependent DNA helicase PcrA7e-92338
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II4e-91336
NC_014033:1152994:1154615115461511570442430Prevotella ruminicola 23 chromosome, complete genomeputative ATP-dependent DNA helicase PcrA2e-90334
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase2e-90333
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase5e-90332
NC_014752:197000:2004822004822026892208Neisseria lactamica ST-640, complete genomeDNA helicase II1e-84314
NC_008752:2056547:2074331207433120767872457Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase1e-80301
NC_009441:4449500:4470831447083144731942364Flavobacterium johnsoniae UW101 chromosome, complete genomeUvrD/REP helicase1e-78294
NC_017080:1981788:1981788198178819841962409Phycisphaera mikurensis NBRC 102666, complete genomeATP-dependent DNA helicase PcrA8e-76285
NC_006672:6000:2014120141221892049Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceDNA helicase II UvrD2e-75283
NC_010718:3039434:3039434303943430416982265Natranaerobius thermophilus JW/NM-WN-LF, complete genomeUvrD/REP helicase1e-65251
NC_012796:4693500:4738098473809847399721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase1e-65251
NC_012796:2041579:2051898205189820537721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase5e-65249
NC_012796:4693500:4707295470729547091481854Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase1e-63245
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase2e-63244
NC_019896:2805098:2819463281946328217422280Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein7e-61235
NC_011295:33500:5033750337524272091Coprothermobacter proteolyticus DSM 5265, complete genomeATP-dependent DNA helicase PcrA6e-59229
NC_014507:2319842:2335593233559323386073015Methanoplanus petrolearius DSM 11571 chromosome, complete genomeUvrD/REP helicase3e-57223
NC_010520:1614333:1614333161433316163452013Clostridium botulinum A3 str. Loch Maree, complete genomeputative ATP-dependent DNA helicase PcrA3e-57223
NC_010003:795355:8349168349168370362121Petrotoga mobilis SJ95, complete genomeUvrD/REP helicase2e-55217
NC_018876:168207:1682071682071712693063Methanolobus psychrophilus R15 chromosome, complete genomeUvrD/REP helicase3e-55217
NC_014974:1539950:1545650154565015475151866Thermus scotoductus SA-01 chromosome, complete genomeATP-dependent DNA helicase PcrA6e-55216
NC_003063:304962:3068053068053089252121Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-54214
NC_003305:1743939:1765832176583217678982067Agrobacterium tumefaciens str. C58 chromosome linear, completeATP-dependent DNA helicase1e-54214
NC_014970:928240:9282409282409301591920Mycoplasma haemofelis str. Langford 1, complete genomeATP-dependent DNA helicase UvrD/PcrA4e-54213
NC_007519:3527207:3527207352720735293662160Desulfovibrio alaskensis G20 chromosome, complete genomeATP-dependent DNA helicase UvrD2e-52207
NC_017191:1173989:1244946124494612467421797Bacillus amyloliquefaciens XH7 chromosome, complete genomeUvrD/REP helicase3e-52207
NC_017188:1172181:1243369124336912451651797Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-dependent DNA helicase, uvrD-like protein3e-52207
NC_014221:38000:4901149011523313321Truepera radiovictrix DSM 17093 chromosome, complete genomeUvrD/REP helicase3e-52207
NC_017190:2130651:2212720221272022145161797Bacillus amyloliquefaciens LL3 chromosome, complete genomeUvrD/REP helicase4e-52206
NC_014098:2225174:2258626225862622608482223Bacillus tusciae DSM 2912 chromosome, complete genomeUvrD/REP helicase6e-49196
NC_015499:1403447:1422710142271014245421833Thermodesulfobium narugense DSM 14796 chromosome, complete genomeUvrD/REP helicase6e-49196
NC_011832:619874:6202246202246232833060Candidatus Methanosphaerula palustris E1-9c, complete genomeUvrD/REP helicase7e-48192
NC_009975:1712577:1739721173972117425612841Methanococcus maripaludis C6, complete genomeUvrD/REP helicase2e-46187
NC_017192:683493:6873356873356893952061Arcobacter sp. L, complete genomeATP-dependent DNA helicase UvrD3e-42173
NC_004557:691944:7134697134697156312163Clostridium tetani E88, complete genomeDNA helicase II6e-42172
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase2e-39164
NC_015676:109743:1250711250711278602790Methanosalsum zhilinae DSM 4017 chromosome, complete genomeUvrD/REP helicase2e-36154
NC_008781:2575213:2586714258671425901393426Polaromonas naphthalenivorans CJ2, complete genomeUvrD/REP helicase1e-33145
NC_012704:1747539:1749208174920817513252118Corynebacterium kroppenstedtii DSM 44385, complete genomeputative ATP-dependent DNA helicase II2e-32140
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase6e-32139
NC_015578:3561838:3561838356183835651973360Treponema primitia ZAS-2 chromosome, complete genomeDNA and RNA helicase3e-31137
NC_009484:857384:8840898840898860081920Acidiphilium cryptum JF-5 chromosome, complete genomeUvrD/REP helicase3e-31137
NC_009850:566755:5667555667555688002046Arcobacter butzleri RM4018, complete genomeATP-dependent DNA helicase, UvrD/Rep family5e-31136
NC_017904:2162045:2177783217778321805482766Mycobacterium sp. MOTT36Y chromosome, complete genomeDNA/RNA helicase8e-31135
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase2e-30135
NC_016147:2337244:2367923236792323712433321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeUvrD/Rep-family ATP-dependent DNA helicase2e-30135
NC_013520:1860286:1862789186278918653772589Veillonella parvula DSM 2008, complete genomeUvrD/REP helicase3e-30134
NC_011059:2478075:2488075248807524910292955Prosthecochloris aestuarii DSM 271, complete genomeUvrD/REP helicase4e-30133
NC_012982:711122:7184207184207218243405Hirschia baltica ATCC 49814, complete genomeUvrD/REP helicase4e-30133
NC_017047:2042346:2042926204292620463183393Rahnella aquatilis HX2 chromosome, complete genomeUvrD/REP helicase1e-29132
NC_016604:917972:9347229347229374932772Mycobacterium rhodesiae NBB3 chromosome, complete genomeDNA/RNA helicase3e-29130
NC_009801:3374501:3383223338322333851151893Escherichia coli E24377A, complete genomehelicase, UvrD family7e-29129
NC_015724:411860:4174754174754192651791Cupriavidus necator N-1 plasmid BB2p, complete sequenceDNA helicase1e-28129
NC_015458:2338437:2370476237047623723951920Pusillimonas sp. T7-7 chromosome, complete genomeDNA helicase8e-28125
NC_018867:10238:5577655776576231848Dehalobacter sp. CF chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA1e-27125
NC_019942:1078837:1093005109300510957792775Aciduliprofundum sp. MAR08-339, complete genomeDNA/RNA helicase, superfamily I2e-27125
NC_015977:2807782:2831058283105828339462889Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I helicase domain and RecB family exonuclease domain containing protein2e-27124
NC_010102:997417:1014640101464010180233384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-27124
NC_004603:1115134:1135576113557611389953420Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative ATP-dependent DNA helicase2e-27124
NC_010682:1593108:1604302160430216060231722Ralstonia pickettii 12J chromosome 1, complete sequenceUvrD/REP helicase7e-27122
NC_009483:2136424:2144486214448621463481863Geobacter uraniireducens Rf4 chromosome, complete genomeUvrD/REP helicase8e-27122
NC_013731:11605:4345543455463552901Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequenceUvrD/REP helicase2e-26121
NC_011761:999791:1015352101535210175892238Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeATP-dependent DNA helicase, UvrD/REP family4e-26120
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase8e-25115
NC_013665:918313:9634339634339666963264Methanocella paludicola SANAE, complete genomeputative ATP-dependent DNA helicase2e-24115
NC_007651:1620000:1633823163382316365852763Burkholderia thailandensis E264 chromosome I, complete sequenceSuperfamily I DNA and RNA helicases4e-24113
NC_014394:942015:9649409649409666371698Gallionella capsiferriformans ES-2 chromosome, complete genomeUvrD/REP helicase8e-24112
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase8e-24112
NC_012526:765000:7877747877747903232550Deinococcus deserti VCD115, complete genomeputative ATP-dependent DNA helicase2e-23111
NC_009051:1455183:1482183148218314849182736Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase1e-22108
NC_005241:380415:3847673847673864941728Ralstonia eutropha H16 megaplasmid pHG1, complete sequenceDNA helicase superfamily protein I2e-22108
NC_012856:207194:2180032180032209152913Ralstonia pickettii 12D chromosome 1, complete genomeUvrD/REP helicase2e-22108
NC_014803:709000:7160817160817179971917Pseudoalteromonas sp. SM9913 chromosome chromosome I, completeUvrD family helicase6e-22106
NC_010379:73718:8792687926900192094Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequenceDNA helicase II6e-22106
NC_007974:2048000:2081873208187320836481776Ralstonia metallidurans CH34 chromosome 2, complete sequenceSuperfamily I DNA and RNA helicases-like protein5e-21103
NC_004578:5336773:5384766538476653874892724Pseudomonas syringae pv. tomato str. DC3000, complete genomeUvrD/REP helicase family protein1e-20102
NC_017033:1525132:1533469153346915367803312Frateuria aurantia DSM 6220 chromosome, complete genomeDNA/RNA helicase5e-20100
NC_013037:1072266:1085163108516310879612799Dyadobacter fermentans DSM 18053, complete genomeUvrD/REP helicase3e-1997.8
NC_021184:1484352:1504552150455215064291878Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA/RNA helicase, superfamily I6e-1996.7
NC_007951:2087385:2104394210439421059561563Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative ATP-dependent DNA helicase, Rep6e-1893.2
NC_015567:313035:3248943248943281993306Serratia sp. AS9 chromosome, complete genomeUvrD/REP helicase6e-1893.2
NC_015566:316340:3247293247293280343306Serratia sp. AS12 chromosome, complete genomeUvrD/REP helicase6e-1893.2
NC_008757:206036:2226752226752245341860Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeUvrD/REP helicase2e-1791.3
NC_003143:1630000:1632891163289116348761986Yersinia pestis CO92, complete genomeputative helicase IV2e-1791.3
NC_010067:1829041:1855895185589518579492055Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1687.4
NC_014729:1185294:1198980119898012024383459Halogeometricum borinquense DSM 11551 chromosome, complete genomeATP-dependent exonuclase v subunit beta, helicase and exonuclease domain-containing6e-1686.7
NC_015574:868000:8875628875628899192358Methanobacterium sp. SWAN-1 chromosome, complete genomeUvrD/REP helicase6e-1686.7
NC_009075:15017:3059630596323951800Burkholderia pseudomallei 668 chromosome II, complete sequenceUvrD/REP helicase1e-1585.1
NC_015436:202384:217765217765218238474Spirochaeta coccoides DSM 17374 chromosome, complete genomeUvrD/REP helicase1e-1585.1
NC_008752:725189:7342797342797360781800Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase2e-1585.1
NC_012704:1747539:1752639175263917563193681Corynebacterium kroppenstedtii DSM 44385, complete genomeputative ATP-dependent DNA helicase II3e-1584.3
NC_013093:915248:9333579333579374064050Actinosynnema mirum DSM 43827, complete genomeUvrD/REP helicase3e-1584.3
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase3e-1584.3
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA1e-1482.4
NC_014311:3076519:3093373309337330950101638Ralstonia solanacearum PSI07 chromosome, complete genomeATP-dependent DNA helicase Rep1e-1482.4
NC_016943:21364:2704927049288061758Blastococcus saxobsidens DD2, complete genomeputative DNA helicase1e-1482
NC_016745:3170384:3183733318373331857452013Oceanimonas sp. GK1 chromosome, complete genomeDNA helicase IV2e-1481.3
NC_009092:1441813:1461981146198114640172037Shewanella loihica PV-4, complete genomeUvrD/REP helicase2e-1481.3
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase3e-1480.9
NC_020388:1479568:1527842152784215316603819Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase4e-1480.5
NC_016012:16134:1613416134197183585Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeATP-dependent deoxyribonuclease chain A5e-1480.5
NC_020388:1869000:1872073187207318755343462Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase5e-1480.1
NC_020244:3961337:3976161397616139786412481Bacillus subtilis XF-1, complete genomeATP-dependent DNA helicase5e-1480.1
NC_007426:1840670:1859558185955818626443087Natronomonas pharaonis DSM 2160, complete genomeprobable helicase9e-1479.3
NC_015738:978794:1043373104337310470443672Eggerthella sp. YY7918, complete genomeATP-dependent exoDNAse exonuclease V subunit beta1e-1378.6
NC_012691:2614603:2651101265110126529151815Tolumonas auensis DSM 9187, complete genomeUvrD/REP helicase2e-1378.2
NC_009089:1202261:1221251122125112234702220Clostridium difficile 630, complete genomeputative helicase4e-1377.4
NC_009792:3665369:3674894367489436766151722Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-1376.3
NC_016776:1609476:1609476160947616112601785Bacteroides fragilis 638R, complete genomeputative ATP-dependent DNA helicase7e-1376.3
NC_014394:1554373:1566790156679015719135124Gallionella capsiferriformans ES-2 chromosome, complete genomeATP-dependent DNA helicase, RecQ family1e-1275.9
NC_013421:1780722:1782499178249917843191821Pectobacterium wasabiae WPP163, complete genomeUvrD/REP helicase2e-1275.1
NC_008609:1976403:2013688201368820154631776Pelobacter propionicus DSM 2379, complete genomeUvrD/REP helicase2e-1275.1
NC_020409:297258:2972582972583004043147Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUvrD/REP helicase2e-1275.1
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase2e-1274.7
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit2e-1274.7
NC_013316:1081044:1099964109996411021832220Clostridium difficile R20291, complete genomeputative helicase3e-1274.3
NC_006576:414696:4315394315394347243186Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-1274.3
NC_007604:1183497:1186081118608111892663186Synechococcus elongatus PCC 7942, complete genomehypothetical protein3e-1274.3
NC_014720:4170:2938329383316532271Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuvrd/rep helicase5e-1273.6
NC_009515:1409912:1446811144681114487961986Methanobrevibacter smithii ATCC 35061, complete genomeUvrD/Rep family helicase1e-1172.4
NC_008358:2638245:2676631267663126817785148Hyphomonas neptunium ATCC 15444, complete genomeATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain protein2e-1172
NC_020063:1194000:1201945120194512071015157Enterobacteriaceae bacterium strain FGI 57, complete genomeATP-dependent DNA helicase, RecQ family2e-1171.6
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit2e-1171.2
NC_007912:231817:2505152505152523591845Saccharophagus degradans 2-40, complete genomeUvrD/REP helicase family protein3e-1171.2
NC_013850:1753716:1762794176279417646111818Klebsiella variicola At-22 chromosome, complete genomeUvrD/REP helicase6e-1170.1
NC_008463:2467219:2480409248040924855325124Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative DNA helicase5e-1170.1
NC_010803:1436397:1454628145462814583083681Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, beta subunit9e-1169.3
NC_009442:908507:9070069070069085501545Streptococcus suis 05ZYH33 chromosome, complete genomeDNA helicase1e-1068.9
NC_014376:3732547:3757360375736037592191860Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase1e-1068.6
NC_010939:405477:4101204101204129842865Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehelicase IV2e-1068.6
NC_010939:1986263:2024100202410020269642865Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehelicase IV2e-1068.6
NC_014731:296000:3072753072753108173543Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeDNA/RNA helicase, superfamily I2e-1068.6
NC_014614:260782:2675712675712711253555Clostridium sticklandii, complete genomeATP-dependent nuclease, subunit A3e-1067.8
NC_009089:1202261:1227866122786612316933828Clostridium difficile 630, complete genomeATP-dependent nuclease subunit A5e-1067
NC_015954:1662129:1662129166212916650112883Halophilic archaeon DL31 chromosome, complete genomeUvrD/REP helicase5e-1067
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)8e-1066.2
NC_012673:1046016:1071677107167710745712895Exiguobacterium sp. AT1b, complete genomeUvrD/REP helicase1e-0965.9
NC_013316:1081044:1106579110657911104063828Clostridium difficile R20291, complete genomeATP-dependent nuclease subunit A1e-0965.9
NC_007969:2885249:2892227289222728950942868Psychrobacter cryohalolentis K5, complete genomeUvrD/REP helicase1e-0965.5
NC_007426:1840670:1862933186293318658152883Natronomonas pharaonis DSM 2160, complete genomeprobable ATP-dependent helicase2e-0965.1
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase2e-0965.1
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein3e-0964.7
NC_009523:2769154:2783054278305427851862133Roseiflexus sp. RS-1 chromosome, complete genomeUvrD/REP helicase3e-0964.3
NC_015425:369225:3726203726203763543735Clostridium botulinum BKT015925 chromosome, complete genomeATP-dependent nuclease subunit A6e-0963.5
NC_002947:4167500:4184219418421941858771659Pseudomonas putida KT2440, complete genomehelicase, putative5e-0963.5
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase6e-0963.2
NC_009720:870194:8701948701948735173324Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase1e-0862.8
NC_013158:1686239:1720955172095517238012847Halorhabdus utahensis DSM 12940, complete genomeUvrD/REP helicase1e-0862.4
NC_009138:1974935:2006405200640520081711767Herminiimonas arsenicoxydans, complete genomeputative DNA helicase II1e-0862.4
NC_020291:1:2221022210259413732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATP-dependent helicase/nuclease subunit A2e-0862
NC_007951:2087385:210878621087862109004219Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-0862
NC_012028:451982:4815434815434862334691Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genome1e-0862
NC_011898:3973627:3977028397702839793102283Clostridium cellulolyticum H10, complete genomesuperfamily I DNA helicase1e-0862
NC_015563:4629436:4641223464122346431181896Delftia sp. Cs1-4 chromosome, complete genomeUvrD/REP helicase2e-0861.6
NC_010688:2781624:2830414283041428322281815Xanthomonas campestris pv. campestris, complete genomeATP-dependent DNA helicase3e-0861.2
NC_015978:1266196:1262475126247512662033729Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeATP-dependent helicase/nuclease subunit A3e-0860.8
NC_014010:1392536:1422347142234714250912745Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeUvrD/REP helicase4e-0860.5
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor5e-0860.5
NC_013421:3093995:3112777311277731148342058Pectobacterium wasabiae WPP163, complete genomeUvrD/REP helicase5e-0860.5
NC_008618:1526392:1530475153047515325472073Bifidobacterium adolescentis ATCC 15703, complete genomeputative helicase IV5e-0860.1
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor5e-0860.1
NC_012780:189949:192203192203192772570Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequenceDNA helicase II / ATP-dependent DNA helicase PcrA5e-0860.1
NC_012856:1080000:1096679109667910984421764Ralstonia pickettii 12D chromosome 1, complete genomeUvrD/REP helicase8e-0859.7
NC_010682:3313944:3326681332668133283541674Ralstonia pickettii 12J chromosome 1, complete sequenceUvrD/REP helicase1e-0759.3
NC_020299:127480:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein1e-0759.3
NC_020299:149118:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein1e-0759.3
NC_014914:1327245:1328735132873513305941860Taylorella equigenitalis MCE9 chromosome, complete genomeDNA helicase IV9e-0859.3
NC_015666:252740:3158373158373187162880Halopiger xanaduensis SH-6 chromosome, complete genomeUvrD/REP helicase9e-0859.3
NC_010102:2020762:2039549203954920416032055Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0758.9
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta1e-0758.9
NC_011149:1035990:1035990103599010380442055Salmonella enterica subsp. enterica serovar Agona str. SL483,helicase IV1e-0758.9
NC_008757:151862:1666791666791683431665Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeUvrD/REP helicase1e-0758.9
NC_008150:844727:8447278447278467812055Yersinia pestis Antiqua, complete genomeputative helicase IV1e-0758.9
NC_008149:2802392:2848814284881428508682055Yersinia pestis Nepal516, complete genomehelicase IV1e-0758.9
NC_014029:1702338:1702338170233817043922055Yersinia pestis Z176003 chromosome, complete genomeDNA helicase IV1e-0758.9
NC_017154:1644404:1644404164440416464582055Yersinia pestis D106004 chromosome, complete genomeDNA helicase IV1e-0758.9
NC_006511:1808815:1829835182983518318892055Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChelicase IV (75 kD helicase)2e-0758.5
NC_011147:1802535:1825018182501818270722055Salmonella enterica subsp. enterica serovar Paratyphi A strDNA helicase IV2e-0758.5
NC_012125:2687980:2706778270677827088322055Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA helicase IV2e-0758.5
NC_004631:1881214:1903289190328919053432055Salmonella enterica subsp. enterica serovar Typhi Ty2, completehelicase IV2e-0758.5
NC_016832:1880174:1900139190013919021932055Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Helicase IV2e-0758.5
NC_013520:1905554:1912628191262819164943867Veillonella parvula DSM 2008, complete genomerecombination helicase AddA2e-0758.5
NC_011071:2770229:2778256277825627810092754Stenotrophomonas maltophilia R551-3, complete genomeUvrD/REP helicase2e-0758.2
NC_017208:1147230:1159040115904011627653726Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent nuclease subunit A2e-0757.8
NC_005945:1103729:1115543111554311192683726Bacillus anthracis str. Sterne, complete genomeATP-dependent nuclease, subunit A3e-0757.8
NC_012659:1103737:1115551111555111192763726Bacillus anthracis str. A0248, complete genomeATP-dependent nuclease, subunit A3e-0757.8
NC_011969:1181302:1191830119183011955553726Bacillus cereus Q1 chromosome, complete genomeATP-dependent nuclease, subunit a3e-0757.8
NC_003909:1244000:1254852125485212585773726Bacillus cereus ATCC 10987, complete genomeATP-dependent nuclease, subunit A3e-0757.8
NC_014335:1094000:1105302110530211090273726Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent nuclease subunit A3e-0757.8
NC_011725:1150779:1162548116254811662733726Bacillus cereus B4264 chromosome, complete genomeATP-dependent nuclease subunit A3e-0757.8
NC_010943:3069082:3072776307277630755352760Stenotrophomonas maltophilia K279a, complete genomeputative helicase IV3e-0757.8
NC_011772:1094534:1106450110645011101753726Bacillus cereus G9842, complete genomeATP-dependent nuclease, subunit A3e-0757.8
NC_004722:1108649:1120491112049111242163726Bacillus cereus ATCC 14579, complete genomeATP-dependent nuclease subunit A2e-0757.8
NC_014171:1118000:1128345112834511320703726Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent nuclease subunit A2e-0757.8
NC_016641:5528826:5539691553969155437884098Paenibacillus terrae HPL-003 chromosome, complete genomeATP-dependent nuclease subunit A2e-0757.8
NC_014483:3498395:3506660350666035106794020Paenibacillus polymyxa E681 chromosome, complete genomeATP-dependent nuclease subunit A4e-0757.4
NC_014622:3819495:3827329382732938313484020Paenibacillus polymyxa SC2 chromosome, complete genomerecombination helicase adda4e-0757.4
NC_014618:2989000:3007002300700230090562055Enterobacter cloacae SCF1 chromosome, complete genomeUvrD/REP helicase4e-0757.4
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit4e-0757.4
NC_012880:3125261:3145876314587631479332058Dickeya dadantii Ech703, complete genomeUvrD/REP helicase4e-0757.4
NC_003901:25500:3053030530331272598Methanosarcina mazei Go1, complete genomesuperfamily I DNA/RNA helicase3e-0757.4
NC_013166:32474:6953369533713651833Kangiella koreensis DSM 16069, complete genomeUvrD/REP helicase5e-0757
NC_010184:1114000:1121749112174911254743726Bacillus weihenstephanensis KBAB4, complete genomeRecombination helicase AddA7e-0756.6
NC_009428:1827352:1863008186300818659442937Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeUvrD/REP helicase7e-0756.6
NC_005125:2887319:2900009290000929021322124Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-0756.6
NC_015428:2291430:2308080230808023118383759Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeATP-dependent helicase/nuclease subunit A7e-0756.2
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0756.2
NC_004061:498483:4984834984835020223540Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 135 kDa polypeptide8e-0756.2
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA8e-0756.2
NC_009429:401500:4116594116594135121854Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein9e-0756.2
NC_012724:2682154:2693828269382826966652838Burkholderia glumae BGR1 chromosome 1, complete genomeUvrD/REP helicase1e-0655.5
NC_003919:2639080:2648746264874626515652820Xanthomonas axonopodis pv. citri str. 306, complete genomehelicase IV2e-0655.1
NC_010725:3315007:3335885333588533390283144Methylobacterium populi BJ001, complete genomeUvrD/REP helicase2e-0655.1
NC_008278:6854759:6868682686868268708412160Frankia alni ACN14a, complete genomeputative DNA helicase2e-0655.1
NC_004557:2607073:2609418260941826115502133Clostridium tetani E88, complete genomeATP-dependent DNA helicase rep2e-0655.1
NC_015732:30472:6948969489730223534Spirochaeta caldaria DSM 7334 chromosome, complete genomeUvrD/REP helicase2e-0655.1
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA2e-0654.7
NC_021182:2360500:2367269236726923712613993Clostridium pasteurianum BC1, complete genomerecombination helicase AddA3e-0654.7
NC_019902:1061432:108987610898761090442567Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II related protein4e-0653.9
NC_006177:1422932:1438983143898314410642082Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase6e-0653.5
NC_016627:3972751:3975148397514839789123765Clostridium clariflavum DSM 19732 chromosome, complete genomerecombination helicase AddA6e-0653.1