Pre_GI: BLASTP Hits

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Query: NC_007347:3612918:3618690 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3618690, End: 3619034, Length: 345

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:5867782:588514258851425885579438Pseudomonas putida ND6 chromosome, complete genomepeptidyl-tRNA hydrolase domain-containing protein3e-24110
NC_009512:2782000:279086127908612791274414Pseudomonas putida F1, complete genomeClass I peptide chain release factor4e-24110
NC_008781:2883968:288678728867872887191405Polaromonas naphthalenivorans CJ2, complete genomeClass I peptide chain release factor4e-24109
NC_008740:3259962:326165432616543262067414Marinobacter aquaeolei VT8, complete genomeClass I peptide chain release factor4e-21100
NC_020211:4168189:418734241873424187755414Serratia marcescens WW4, complete genomepetidyl-tRNA hydrolase, ribosome-attached4e-21100
NC_009663:738846:760730760730761152423Sulfurovum sp. NBC37-1, complete genomepeptide chain release factor 26e-2095.9
NC_010506:774455:774455774455774868414Shewanella woodyi ATCC 51908, complete genomeClass I peptide chain release factor1e-1478.6
NC_010511:4696868:469806346980634698488426Methylobacterium sp. 4-46 chromosome, complete genomeclass I peptide chain release factor2e-1374.7
NC_014541:475350:521390521390521815426Ferrimonas balearica DSM 9799 chromosome, complete genomeClass I peptide chain release factor1e-1272
NC_014315:2834000:284507328450732845498426Nitrosococcus watsoni C-113 chromosome, complete genomeClass I peptide chain release factor3e-1270.5
NC_013960:1484824:149698114969811497409429Nitrosococcus halophilus Nc4 chromosome, complete genomeClass I peptide chain release factor7e-1165.9
NC_014962:826563:843778843778844206429Isosphaera pallida ATCC 43644 chromosome, complete genomeClass I peptide chain release factor8e-0958.9