Pre_GI: BLASTP Hits

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Query: NC_007347:1239982:1245102 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1245102, End: 1245476, Length: 375

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015726:2177783:218502721850272185428402Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein4e-24110
NC_003295:199354:210273210273210458186Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-1580.5
NC_012791:721813:753551753551753943393Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, TraR/DksA family6e-1269.3
NC_004193:375416:608038608038608712675Oceanobacillus iheyensis HTE831, complete genomehypothetical protein1e-0858.5
NC_012472:4630485:465155246515524652283732Bacillus cereus 03BB102, complete genomeDNA binding protein, DksA/TraR family6e-0752.8
NC_014335:4566692:458285545828554583586732Bacillus cereus biovar anthracis str. CI chromosome, completeDnaK suppressor protein6e-0752.8
NC_016771:4569941:458510145851014585832732Bacillus cereus NC7401, complete genomeDNA binding protein, DksA/TraR family1e-0652
NC_011658:4616933:463133646313364632067732Bacillus cereus AH187 chromosome, complete genomeDksA/TraR family DNA binding protein1e-0652
NC_002570:2649759:266829426682942668956663Bacillus halodurans C-125, complete genomehypothetical protein3e-0650.4
NC_003911:2379254:239285123928512393210360Silicibacter pomeroyi DSS-3, complete genomednaK suppressor protein, putative7e-0649.3