Pre_GI: BLASTP Hits

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Query: NC_007337:10464:31209 Ralstonia eutropha JMP134 plasmid 1, complete sequence

Start: 31209, End: 32411, Length: 1203

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4167500:4237124423712442382451122Pseudomonas putida KT2440, complete genomemuconate cycloisomerase3e-77289
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 28e-72271
NC_011740:1494796:1516005151600515172071203Escherichia fergusonii ATCC 35469, complete genomeMuconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE)3e-71269
NC_007492:3384077:3399964339996434010851122Pseudomonas fluorescens PfO-1, complete genomeMandelate racemase/muconate lactonizing enzyme3e-71269
NC_020209:1949500:1971604197160419727311128Pseudomonas poae RE*1-1-14, complete genomemuconate cycloisomerase 17e-71268
NC_017986:5833819:5837087583708758382201134Pseudomonas putida ND6 chromosome, complete genomeCatB8e-70264
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase8e-66251
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I8e-66251
NC_010170:3944228:3958433395843339595451113Bordetella petrii, complete genomeChloromuconate cycloisomerase5e-66251
NC_014641:20103:2290822908240201113Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechloromuconate cycloisomerase5e-66251
NC_007337:10464:2166921669227811113Ralstonia eutropha JMP134 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme4e-64245
NC_015312:3290887:3303947330394733050681122Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemuconate and chloromuconate cycloisomerase2e-62239
NC_010552:592154:6173636173636184961134Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemuconate and chloromuconate cycloisomerase3e-60232
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein2e-38160
NC_015136:2282488:2321268232126823224281161Burkholderia sp. CCGE1001 chromosome 1, complete sequencemandelate racemase/muconate lactonizing protein2e-35150
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-35150
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein1e-35150
NC_010170:3944228:394356639435663944231666Bordetella petrii, complete genomemuconate cycloisomerase3e-33142
NC_007948:4646344:4647276464727646484571182Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-32140
NC_003911:3864852:3869173386917338703031131Silicibacter pomeroyi DSS-3, complete genomemuconate cycloisomerase I3e-32139
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase3e-31136
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase5e-31135
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase2e-30134
NC_019791:570923:5709235709235720561134Caldisphaera lagunensis DSM 15908 chromosome, complete genomeo-succinylbenzoic acid synthetase4e-27122
NC_008699:857837:8769608769608780631104Nocardioides sp. JS614, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein3e-27122
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme8e-27121
NC_013757:1343396:1359369135936913604721104Geodermatophilus obscurus DSM 43160, complete genomeMandelate racemase/muconate lactonizing protein9e-27121
NC_010170:3908500:394141639414163941949534Bordetella petrii, complete genomeputative Enolase7e-25115
NC_014958:3393855:3396376339637633974821107Deinococcus maricopensis DSM 21211 chromosome, complete genomeo-succinylbenzoic acid (OSB) synthetase1e-24114
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-24112
NC_004193:2921103:2926661292666129278361176Oceanobacillus iheyensis HTE831, complete genomemuconate cycloisomerase9e-23108
NC_013741:1196997:1199986119998612010651080Archaeoglobus profundus DSM 5631, complete genomeMandelate racemase/muconate lactonizing protein2e-22107
NC_017093:3777178:3783389378338937844891101Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme-like protein8e-22105
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase4e-21102
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family2e-20100
NC_009033:791515:7970957970957982101116Staphylothermus marinus F1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-1997.8
NC_007963:2777066:2793703279370327949711269Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme2e-1997.4
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-1996.7
NC_013966:399215:4359574359574370121056Haloferax volcanii DS2 plasmid pHV4, complete sequencemandelate racemase / muconate lactonizing enzyme homolog3e-1893.2
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme6e-1892
NC_015954:1222776:1224258122425812253011044Halophilic archaeon DL31 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-1791.3
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase2e-1790.5
NC_003228:3212500:3220355322035532213711017Bacteroides fragilis NCTC 9343, complete genomeputative muconate cycloisomerase2e-1790.1
NC_019964:1873167:1890729189072918920331305Halovivax ruber XH-70, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase3e-1789.7
NC_009718:1771500:1784423178442317854511029Fervidobacterium nodosum Rt17-B1, complete genomemandelate racemase/muconate lactonizing protein2e-1687
NC_015675:6493444:6514670651467065157761107Mesorhizobium opportunistum WSM2075 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1685.9
NC_019973:5869500:5888959588895958900651107Mesorhizobium australicum WSM2073, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase5e-1685.9
NC_014923:5940500:5959999595999959611051107Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeMandelate racemase/muconate lactonizing protein5e-1685.9
NC_013923:45876:4479744797458791083Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceMandelate racemase/muconate lactonizing protein1e-1584.7
NC_012726:2143670:2154817215481721560191203Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1582.4
NC_011725:4799905:4806860480686048079661107Bacillus cereus B4264 chromosome, complete genomeN-acylamino acid racemase9e-1581.6
NC_013440:8405719:8426347842634784273691023Haliangium ochraceum DSM 14365, complete genomeMandelate racemase/muconate lactonizing protein2e-1480.9
NC_014335:4566692:4574000457400045751061107Bacillus cereus biovar anthracis str. CI chromosome, completeo-succinylbenzoate-CoA synthase4e-1479.7
NC_003909:4614789:4620609462060946217151107Bacillus cereus ATCC 10987, complete genomeN-acylamino acid racemase4e-1479.7
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like4e-1479.3
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme4e-1479.3
NC_014171:4681822:4689194468919446903001107Bacillus thuringiensis BMB171 chromosome, complete genomemandelate racemase/muconate lactonizing family protein4e-1479.3
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme6e-1479
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase8e-1478.6
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase1e-1378.2
NC_008600:4626464:4638640463864046397461107Bacillus thuringiensis str. Al Hakam, complete genomeo-succinylbenzoate synthase1e-1378.2
NC_012472:4630485:4642576464257646436821107Bacillus cereus 03BB102, complete genomeN-acylamino acid racemase1e-1377.8
NC_011969:4556296:4564242456424245653121071Bacillus cereus Q1 chromosome, complete genomen-acylamino acid racemase; o-succinylbenzoate synthase1e-1377.8
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein1e-1377.8
NC_017200:4632000:4648033464803346491391107Bacillus thuringiensis serovar finitimus YBT-020 chromosome,enolase superfamily protein; N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme, or2e-1377.4
NC_014119:977136:9923849923849936731290Burkholderia sp. CCGE1002 chromosome chromosome 3, completeMandelate racemase/muconate lactonizing protein3e-1377
NC_016779:4588000:4596265459626545973711107Bacillus cereus F837/76 chromosome, complete genomeO-succinylbenzoate-CoA synthase2e-1377
NC_014297:476510:5207865207865220061221Halalkalicoccus jeotgali B3 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-1377
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein3e-1376.6
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein4e-1376.3
NC_016771:4569941:4576131457613145772371107Bacillus cereus NC7401, complete genomeN-acylamino acid racemase4e-1376.3
NC_011658:4616933:4622366462236646234721107Bacillus cereus AH187 chromosome, complete genomeN-acylamino acid racemase4e-1376.3
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein4e-1376.3
NC_011772:4763542:4776089477608947771951107Bacillus cereus G9842, complete genomeN-acylamino acid racemase4e-1376.3
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-1375.5
NC_010617:558954:5817775817775827901014Kocuria rhizophila DC2201, complete genomeputative o-succinylbenzoate synthase7e-1375.5
NC_013198:394000:4344884344884356211134Lactobacillus rhamnosus GG, complete genomeenolase superfamily protein, N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme / o-succinylbenzoate synthase1e-1274.3
NC_002678:6061448:6084562608456260856651104Mesorhizobium loti MAFF303099, complete genomemuconate lactonizing enzyme4e-1272.8
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1272.8
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein5e-1272.4
NC_012880:3748665:3786817378681737879291113Dickeya dadantii Ech703, complete genomeMandelate racemase/muconate lactonizing protein7e-1272
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme7e-1272
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-1171.2
NC_011992:1912200:1912200191220019135071308Acidovorax ebreus TPSY, complete genomeMandelate racemase/muconate lactonizing protein1e-1171.2
NC_013174:562856:575260575260576216957Jonesia denitrificans DSM 20603, complete genomeMandelate racemase/muconate lactonizing protein2e-1170.5
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein2e-1170.5
NC_012632:816000:8286828286828298841203Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1169.7
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)5e-1169.3
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase8e-1168.6
NC_013037:6281164:6338780633878063399581179Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein9e-1168.6
NC_002678:6061448:6083376608337660845601185Mesorhizobium loti MAFF303099, complete genomechloromuconate cycloisomerase1e-1068.2
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-1067.8
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase2e-1067
NC_018643:807405:8227418227418238441104Alpha proteobacterium HIMB5 chromosome, complete genomemandelate racemase family protein,mandelate racemase family protein3e-1066.6
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme4e-1066.2
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein4e-1066.2
NC_014973:3690371:3723736372373637248451110Geobacter sp. M18 chromosome, complete genomeMandelate racemase/muconate lactonizing protein8e-1065.1
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase9e-1065.1
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase1e-0964.7
NC_013037:2906730:2925411292541129265111101Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein1e-0964.7
NC_015571:801715:8202818202818213511071Porphyromonas gingivalis TDC60, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-0964.3
NC_016610:2077603:2080176208017620812491074Tannerella forsythia ATCC 43037 chromosome, complete genomeputative o-succinylbenzoate synthase1e-0964.3
NC_021182:2013500:2014892201489220160011110Clostridium pasteurianum BC1, complete genomeo-succinylbenzoic acid synthetase2e-0963.9
NC_002950:1571383:1599190159919016002601071Porphyromonas gingivalis W83, complete genomemandelate racemase/muconate lactonizing enzyme family protein4e-0963.2
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase4e-0962.8
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase5e-0962.8
NC_008025:1768756:1785150178515017862381089Deinococcus geothermalis DSM 11300, complete genomeMandelate racemase/muconate lactonizing enzyme-like protein6e-0962.4
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase6e-0962.4
NC_013510:2782240:279655227965522797511960Thermomonospora curvata DSM 43183, complete genomeMandelate racemase/muconate lactonizing protein7e-0962
NC_020126:7255111:726127972612797262265987Myxococcus stipitatus DSM 14675, complete genomemandelate racemase/muconate lactonizing enzyme family protein8e-0962
NC_012521:148886:1544261544261554301005Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative dipeptide epimerase1e-0861.6
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-0860.5
NC_012917:3241196:324279132427913243771981Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMandelate racemase/muconate lactonizing protein4e-0859.7
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase4e-0859.3
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein6e-0858.9
NC_011001:63986:7781177811789891179Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative mandelate racemase/muconate lactonizing enzyme1e-0757.8
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-0757.4
NC_002689:1228061:1250055125005512512211167Thermoplasma volcanium GSS1, complete genomeGalactonate dehydratase3e-0757
NC_013158:363222:3863923863923874201029Halorhabdus utahensis DSM 12940, complete genomeMandelate racemase/muconate lactonizing protein3e-0757
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-0757
NC_008319:787881:7904647904647914891026Synechococcus sp. CC9311, complete genomeMandelate racemase / muconate lactonizing enzyme, N-terminal domain protein3e-0756.6
NC_010364:787766:814708814708815703996Halobacterium salinarum R1, complete genomeO-succinylbenzoate synthase1e-0654.7
NC_002607:795777:822719822719823564846Halobacterium sp. NRC-1, complete genomeYkfB21e-0654.7
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein1e-0654.7
NC_021066:1778000:179252217925221793487966Raoultella ornithinolytica B6, complete genomeL-Ala-D/L-Glu epimerase1e-0654.3
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-0653.9
NC_007948:517893:5355515355515366451095Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme2e-0653.9
NC_012731:2261787:2263456226345622644841029Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeL-Ala-D/L-Glu epimerase3e-0653.5
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein8e-0652
NC_016642:1990684:2010756201075620119251170Pseudovibrio sp. FO-BEG1 chromosome, complete genomemandelate racemase/muconate lactonizing protein9e-0652
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase9e-0651.6