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Query: NC_007333:810381 Thermobifida fusca YX, complete genome

Start: 810381, End: 854662, Length: 44282

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007333:11298261129826115911729292Thermobifida fusca YX, complete genome1e-93353BLASTN svgBLASTP svg
NC_014210:32485263248526327306124536Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-56228BLASTN svgBLASTP svg
NC_003888:73374537337453737640338951Streptomyces coelicolor A3(2), complete genome5e-46194BLASTN svgBLASTP svg
NC_009142:5698100*5698100573806239963Saccharopolyspora erythraea NRRL 2338, complete genome3e-44188BLASTN svgBLASTP svg
NC_010572:18728401872840190085328014Streptomyces griseus subsp. griseus NBRC 13350, complete genome8e-36161BLASTN svgBLASTP svg
NC_013159:50292850292853082127894Saccharomonospora viridis DSM 43017, complete genome1e-25127BLASTN svgBLASTP svg
NC_014165:3559305*3559305358380224498Thermobispora bispora DSM 43833 chromosome, complete genome3e-23119BLASTN svgBLASTP svg
NC_013595:86031888603188863891935732Streptosporangium roseum DSM 43021, complete genome4e-22115BLASTN svgBLASTP svg
NC_013510:17034641703464172659923136Thermomonospora curvata DSM 43183, complete genome2e-18103BLASTN svgBLASTP svg
NC_014151:36632953663295368650923215Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015052:1030708*1030708106947238765Bifidobacterium longum subsp. infantis 157F, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008697:55406554068532429919Nocardioides sp. JS614 plasmid pNOCA01, complete sequence5e-0971.9BLASTN svgBLASTP svg
NC_014210:15884261588426161009921674Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-0765.9BLASTN svgBLASTP svg
NC_008686:14728991472899150063527737Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg