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Query: NC_007333:810381:837198 Thermobifida fusca YX, complete genome

Start: 837198, End: 838934, Length: 1737

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011420:1178762:1186639118663911884021764Rhodospirillum centenum SW, complete genomehypothetical protein1e-87324
NC_008782:2326439:2349504234950423512671764Acidovorax sp. JS42, complete genomehypothetical protein6e-84311
NC_008758:12000:1418614186159071722Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein1e-72274
NC_005139:2201820:2258222225822222599611740Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-69262
NC_014307:233045:2410122410122427871776Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein4e-67256
NC_015320:743983:7525227525227542551734Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein2e-59231
NC_010577:151926:1612941612941630901797Xylella fastidiosa M23, complete genomehypothetical protein1e-1585.1
NC_004556:151593:1613501613501631581809Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-1584.7
NC_010529:23775:3577435774377681995Cupriavidus taiwanensis plasmid pRALTA, complete sequenceconserved hypothetical protein, COG52934e-1583.6
NC_010170:2246993:2253871225387122556671797Bordetella petrii, complete genomehypothetical protein9e-1582.4
NC_013440:1190832:1220710122071012225001791Haliangium ochraceum DSM 14365, complete genomeProtein of unknown function DUF23262e-1171.6
NC_000964:4116104:4129602412960241313621761Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1171.2
NC_012214:1212616:1220545122054512222331689Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein6e-1169.7
NC_015177:1822000:1837249183724918390241776Pedobacter saltans DSM 12145 chromosome, complete genomeProtein of unknown function DUF23261e-1068.9
NC_015061:1251905:1260860126086012625751716Rahnella sp. Y9602 chromosome, complete genomehypothetical protein5e-0963.2
NC_010682:1652636:1664199166419916659261728Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein3e-0860.8
NC_016857:2871689:2891273289127328929701698Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein4e-0860.5
NC_016810:2871689:2891273289127328929701698Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-0860.5
NC_013166:194614:2054632054632071841722Kangiella koreensis DSM 16069, complete genomehypothetical protein6e-0859.7