Pre_GI: BLASTP Hits

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Query: NC_007333:810381:827189 Thermobifida fusca YX, complete genome

Start: 827189, End: 828514, Length: 1326

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013159:502928:5273945273945287161323Saccharomonospora viridis DSM 43017, complete genomehypothetical protein5e-161567
NC_003888:7337453:7372859737285973742081350Streptomyces coelicolor A3(2), complete genomeATP/GTP binding protein1e-156553
NC_010572:1872840:1897387189738718987151329Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP/GTP-binding protein3e-156551
NC_016887:1949927:1977092197709219784051314Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP/GTP binding protein3e-156551
NC_007645:3581114:3589353358935335906721320Hahella chejuensis KCTC 2396, complete genomeMethyl-accepting chemotaxis protein1e-148526
NC_013194:3861409:3871682387168238730011320Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completemethyl-accepting chemotaxis protein3e-147521
NC_009338:3359500:3389067338906733903411275Mycobacterium gilvum PYR-GCK chromosome, complete genomeATP/GTP binding protein5e-137488
NC_008757:151862:1728171728171741271311Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completemethyl-accepting chemotaxis protein2e-136485
NC_009142:5698100:5716374571637457176301257Saccharopolyspora erythraea NRRL 2338, complete genomeATP/GTP binding protein3e-134478
NC_013510:1703464:1713110171311017144351326Thermomonospora curvata DSM 43183, complete genomemethyl-accepting chemotaxis protein2e-113409
NC_011891:1278199:1297607129760712989321326Anaeromyxobacter dehalogenans 2CP-1, complete genomeputative ATP/GTP binding protein3e-64246
NC_013440:1580802:1579471157947115808051335Haliangium ochraceum DSM 14365, complete genomemethyl-accepting chemotaxis protein5e-64245
NC_013440:1624561:1624561162456116259131353Haliangium ochraceum DSM 14365, complete genomeputative ATP/GTP binding protein8e-61234
NC_013440:811780:8117808117808131321353Haliangium ochraceum DSM 14365, complete genomeputative ATP/GTP binding protein1e-59230
NC_014148:3959960:3981418398141839827401323Planctomyces limnophilus DSM 3776 chromosome, complete genomeputative ATP/GTP binding protein7e-58224
NC_014217:2020737:2032636203263620339581323Starkeya novella DSM 506 chromosome, complete genomehypothetical protein1e-22107
NC_016010:1822212:1844940184494018462381299Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein2e-20100
NC_010002:5691968:5702668570266857039721305Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1997.4
NC_019942:1078837:1099273109927311005021230Aciduliprofundum sp. MAR08-339, complete genomeProtein of unknown function (DUF2791)4e-1996.3
NC_007333:39579:7412374123754541332Thermobifida fusca YX, complete genomehypothetical protein1e-1894.7
NC_015172:850802:8525368525368538641329Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein3e-1790.1
NC_007907:761486:7834637834637848061344Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1790.1
NC_009656:4527457:4565471456547145667661296Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1789.7
NC_008435:2658986:2688888268888826902011314Rhodopseudomonas palustris BisA53, complete genomehypothetical protein5e-1789.4
NC_007952:3196085:3221085322108532223831299Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein7e-1789
NC_014910:1200605:1215217121521712165301314Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein1e-1688.2
NC_015580:1584078:1595958159595815972621305Novosphingobium sp. PP1Y, complete genomehypothetical protein7e-1685.5
NC_009439:3770282:3780095378009537813901296Pseudomonas mendocina ymp, complete genomehypothetical protein1e-1584.7
NC_008463:2467219:2488133248813324894281296Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-1584.3
NC_017047:2042346:2053677205367720549841308Rahnella aquatilis HX2 chromosome, complete genomebiotin carboxylase3e-1583.6
NC_019673:6259229:6257910625791062592321323Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-1582
NC_016612:28451:4281242812441281317Klebsiella oxytoca KCTC 1686 chromosome, complete genomebiotin carboxylase1e-1481.3
NC_007493:1929000:1938711193871119399821272Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein2e-1480.5
NC_012918:1444333:1455322145532214566711350Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-1274.7
NC_009434:3611738:3747709374770937488751167Pseudomonas stutzeri A1501, complete genomebiotin carboxylase7e-1272.4
NC_011145:4430501:4449771444977144510121242Anaeromyxobacter sp. K, complete genomehypothetical protein1e-1067.8
NC_006370:1810842:1828517182851718297131197Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein4e-1066.6