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Query: NC_007333:810381:820662 Thermobifida fusca YX, complete genome

Start: 820662, End: 824447, Length: 3786

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013159:502928:5208065208065246633858Saccharomonospora viridis DSM 43017, complete genomehypothetical protein0644
NC_014666:6940532:6960453696045369643943942Frankia sp. EuI1c chromosome, complete genomebacteriophage resistance protein PglY3e-173610
NC_016887:1949927:1981623198162319855313909Nocardia cyriacigeorgica GUH-2, complete genomebacteriophage (PhiC31) resistance gene pglY1e-166588
NC_003888:7337453:7362943736294373668273885Streptomyces coelicolor A3(2), complete genomebacteriophage (phiC31) resistance gene pglY2e-164580
NC_009142:5698100:5720356572035657241773822Saccharopolyspora erythraea NRRL 2338, complete genomebacteriophage (phiC31) resistance gene PglY1e-161571
NC_010572:1872840:1889546188954618934453900Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative bacteriophage (phiC31) resistance gene pglY3e-159563
NC_007645:3581114:3593467359346735971503684Hahella chejuensis KCTC 2396, complete genomeprobable phage resistance protein4e-155550
NC_013194:3861409:3875852387585238794993648Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeputative phage resistance protein6e-153542
NC_008757:151862:1768471768471805693723Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeputative phage resistance protein9e-148525
NC_007651:72952:1398451398451435283684Burkholderia thailandensis E264 chromosome I, complete sequencepglY1e-141504
NC_009338:3359500:3392986339298633966783693Mycobacterium gilvum PYR-GCK chromosome, complete genomeputative phage resistance protein5e-121436
NC_015859:1898693:1922130192213019260443915Corynebacterium variabile DSM 44702 chromosome, complete genomeputative phage resistance protein2e-111404
NC_010162:10676864:1069458310694583106982303648Sorangium cellulosum 'So ce 56', complete genomebacteriophage phiC31 resistance gene6e-102373