Pre_GI: BLASTP Hits

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Query: NC_007333:810381:810381 Thermobifida fusca YX, complete genome

Start: 810381, End: 814646, Length: 4266

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013159:502928:5080035080035122294227Saccharomonospora viridis DSM 43017, complete genomenuclease-like protein0730
NC_009142:5698100:5727827572782757317533927Saccharopolyspora erythraea NRRL 2338, complete genomeserine/threonine protein kinase0635
NC_014666:6940532:6951904695190469566554752Frankia sp. EuI1c chromosome, complete genomeserine/threonine protein kinase1e-179631
NC_003888:7337453:7348537734853773532104674Streptomyces coelicolor A3(2), complete genomeprotein kinase2e-152540
NC_016887:1949927:1989157198915719936414485Nocardia cyriacigeorgica GUH-2, complete genomeputative serine/threonine protein kinase4e-148526
NC_010572:1872840:1877109187710918817854677Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative serine/threonine protein kinase2e-138494
NC_007651:72952:1319181319181361204203Burkholderia thailandensis E264 chromosome I, complete sequenceProtein kinase domain protein8e-131469
NC_007645:3581114:3602720360272036068774158Hahella chejuensis KCTC 2396, complete genomeSerine/threonine protein kinase9e-129462
NC_014391:1317957:1329830132983013339394110Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNERD domain-containing protein2e-123444
NC_009338:3359500:3400244340024434044614218Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase1e-88328
NC_010162:10676864:1067686410676864106812974434Sorangium cellulosum 'So ce 56', complete genomeprotein kinase2e-76288
NC_015859:1898693:1913373191337319173804008Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein6e-44180
NC_014366:3555425:3579027357902735831934167Gamma proteobacterium HdN1, complete genomeProtein kinase2e-1586.3
NC_013757:21245:3998439984419271944Geodermatophilus obscurus DSM 43160, complete genomeserine/threonine protein kinase with PASTA sensor(s)3e-1172
NC_016943:21364:4027640276422011926Blastococcus saxobsidens DD2, complete genomeTwo component serine/threonine-protein kinase with PASTA sensors2e-1069.3
NC_011896:1:1899718997208651869Mycobacterium leprae Br4923, complete genomeputative serine/threonine protein kinase6e-1067.8
NC_002677:1:1900119001208691869Mycobacterium leprae TN, complete genomeputative serine/threonine protein kinase6e-1067.8
NC_014623:6809000:6827988682798868311793192Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeserine/threonine-protein kinase3e-0965.5
NC_015164:1503352:151380615138061514774969Bacteroides salanitronis DSM 18170 chromosome, complete genomeserine/threonine protein kinase4e-0965.1
NC_020126:1873794:1898762189876219033844623Myxococcus stipitatus DSM 14675, complete genomeFis family transcriptional regulator4e-0964.7
NC_009338:817854:8395508395508414271878Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase5e-0964.7
NC_014221:591785:608428608428609180753Truepera radiovictrix DSM 17093 chromosome, complete genomeserine/threonine protein kinase1e-0863.2
NC_012121:837586:8375868375868396282043Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative serine/threonine-protein kinase PknB2e-0862.8
NC_014355:1865003:1936549193654919391672619Candidatus Nitrospira defluvii, complete genomeputative serine/threonine protein kinase2e-0862.4
NC_002570:2616899:2621753262175326237471995Bacillus halodurans C-125, complete genomeserine/threonine protein kinase3e-0862.4
NC_010162:9502480:9518094951809495231905097Sorangium cellulosum 'So ce 56', complete genomeprotein kinase3e-0862
NC_009925:1617414:1624770162477016296714902Acaryochloris marina MBIC11017, complete genomeserine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF8e-0860.5
NC_013730:3956457:3980636398063639859605325Spirosoma linguale DSM 74, complete genomemulti-sensor signal transduction multi-kinase8e-0860.8
NC_017093:6461486:6475678647567864767361059Actinoplanes missouriensis 431, complete genomeputative serine/threonine protein kinase8e-0860.8
NC_019771:2945719:2945719294571929472091491Anabaena cylindrica PCC 7122, complete genomeserine/threonine protein kinase1e-0760.5
NC_014355:1865003:1932288193228819340031716Candidatus Nitrospira defluvii, complete genomeputative serine/threonine protein kinase1e-0760.5
NC_014484:762710:7782987782987801541857Spirochaeta thermophila DSM 6192 chromosome, complete genomeserine/threonine-protein kinase Sps11e-0760.5
NC_020291:3973084:3989626398962639910981473Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeserine/threonine protein kinase2e-0759.7
NC_015723:280368:3037783037783092855508Cupriavidus necator N-1 chromosome 2, complete sequencenodulation protein NodV2e-0759.3
NC_015519:2413323:2414094241409424155571464Tepidanaerobacter sp. Re1 chromosome, complete genomeserine/threonine protein kinase with TPR repeats3e-0758.9
NC_008278:2882567:2896443289644329003033861Frankia alni ACN14a, complete genomehypothetical protein4e-0758.5
NC_014165:27246:2888828888306061719Thermobispora bispora DSM 43833 chromosome, complete genomeserine/threonine protein kinase6e-0757.8
NC_012560:2315350:2336728233672823384071680Azotobacter vinelandii DJ, complete genomeserine/threonine-kinase and phosphatase7e-0757.8
NC_021150:2315362:2336740233674023384191680Azotobacter vinelandii CA6, complete genomeserine/threonine-kinase and phosphatase7e-0757.8
NC_016584:3826300:3836450383645038411504701Desulfosporosinus orientis DSM 765 chromosome, complete genomeATPase9e-0757
NC_010162:11908749:1192583111925831119283712541Sorangium cellulosum 'So ce 56', complete genomeprotein kinase1e-0656.6
NC_013440:1408689:1416568141656814208154248Haliangium ochraceum DSM 14365, complete genomeserine/threonine protein kinase1e-0656.6
NC_018870:1417851:1441408144140814432371830Thermacetogenium phaeum DSM 12270 chromosome, complete genomeserine/threonine-protein kinase Sps1e-0657
NC_019673:8581000:8600121860012186017101590Saccharothrix espanaensis DSM 44229 complete genomeSerine/threonine protein kinase1e-0657
NC_018515:3909646:3923616392361639254001785Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeserine/threonine protein kinase2e-0656.2
NC_011661:1807101:1825286182528618272862001Dictyoglomus turgidum DSM 6724, complete genomeserine/threonine protein kinase with Chase2 sensor2e-0656.2
NC_015711:7601733:7622710762271076244761767Myxococcus fulvus HW-1 chromosome, complete genomeserine/threonine-protein kinase PKN12e-0655.8
NC_005027:6143730:6146708614670861524075700Rhodopirellula baltica SH 1, complete genomeserine/threonine-protein kinase3e-0655.1
NC_015565:287900:3115253115253129851461Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeserine/threonine protein kinase with TPR repeats3e-0655.1
NC_011884:1413831:1430871143087114327811911Cyanothece sp. PCC 7425, complete genomeserine/threonine protein kinase with WD40 repeats3e-0655.1
NC_015873:1901939:1922204192220419241201917Megasphaera elsdenii DSM 20460, complete genomekinase domain protein3e-0655.5
NC_010162:11908749:1191809611918096119230604965Sorangium cellulosum 'So ce 56', complete genomeprotein kinase6e-0654.3
NC_010162:9502480:9525492952549295317136222Sorangium cellulosum 'So ce 56', complete genomeprotein kinase9e-0653.9
NC_016584:4905310:4918236491823649199871752Desulfosporosinus orientis DSM 765 chromosome, complete genomeprotein kinase family protein with PASTA domain1e-0553.9