Pre_GI: BLASTP Hits

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Query: NC_007333:537292:554504 Thermobifida fusca YX, complete genome

Start: 554504, End: 555364, Length: 861

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014165:3559305:356047935604793561387909Thermobispora bispora DSM 43833 chromosome, complete genome1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase2e-94345
NC_013510:1295439:129712012971201298013894Thermomonospora curvata DSM 43183, complete genome1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase2e-89328
NC_016111:4245876:426262642626264263528903Streptomyces cattleya NRRL 8057, complete genomeN-acetyl-1-D-myo-inosityl-2-amino-21e-78293
NC_021177:5419620:5443131544313154441501020Streptomyces fulvissimus DSM 40593, complete genome1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase5e-70264
NC_013093:832971:848250848250849101852Actinosynnema mirum DSM 43827, complete genome1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase8e-63240
NC_012590:1004816:101969110196911020581891Corynebacterium aurimucosum ATCC 700975, complete genomemycothiol conjugate amidase3e-39162
NC_016582:11672500:116812481168124811682057810Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-37155
NC_017093:835260:856780856780857661882Actinoplanes missouriensis 431, complete genomeputative mycothiol conjugate amidase4e-37155
NC_012704:652589:674752674752675690939Corynebacterium kroppenstedtii DSM 44385, complete genomemycothiol conjugate amidase2e-36153
NC_016111:4115097:411827741182774119152876Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-35149
NC_008278:6717485:6739787673978767409891203Frankia alni ACN14a, complete genomehypothetical protein8e-31134
NC_019673:8734993:873429287342928735029738Saccharothrix espanaensis DSM 44229 complete genomeLmbE-like protein2e-27123
NC_013946:2854219:285743928574392858254816Meiothermus ruber DSM 1279 chromosome, complete genomeLmbE family protein3e-26119
NC_013169:2581500:259381525938152594645831Kytococcus sedentarius DSM 20547, complete genomeuncharacterized LmbE-like protein7e-1374.7
NC_014318:5183975:519959851995985200392795Amycolatopsis mediterranei U32 chromosome, complete genomeLmbE family protein4e-1168.9
NC_017186:5184000:519963251996325200435804Amycolatopsis mediterranei S699 chromosome, complete genomeLmbE family protein4e-1168.9
NC_010184:3213347:322655132265513227213663Bacillus weihenstephanensis KBAB4, complete genomeLmbE family protein5e-1168.6
NC_014666:1969602:197497219749721975841870Frankia sp. EuI1c chromosome, complete genomeLmbE family protein4e-1065.5
NC_002952:610462:627340627340628005666Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein8e-0857.8
NC_017347:616000:636154636154636819666Staphylococcus aureus subsp. aureus T0131 chromosome, completeGlcNAc-PI de-N-acetylase8e-0857.8
NC_017341:618649:640046640046640711666Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,GlcNAc-PI de-N-acetylase8e-0857.8
NC_009641:597000:617097617097617762666Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein8e-0857.8
NC_007795:541783:559532559532560197666Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein8e-0857.8
NC_017338:588983:605064605064605729666Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeGlcNAc-PI de-N-acetylasee1e-0757.8
NC_006582:2205154:222399422239942224662669Bacillus clausii KSM-K16, complete genomehypothetical protein1e-0757.4
NC_001263:72681:817698176982482714Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein1e-0757.4
NC_002953:588437:609940609940610605666Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein1e-0757.4
NC_007622:567500:584784584784585449666Staphylococcus aureus RF122, complete genomehypothetical protein1e-0757.4
NC_003923:591000:611249611249611914666Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-0757.4
NC_007168:2415361:241875924187592419424666Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-0757.4
NC_014221:3137952:315387331538733154697825Truepera radiovictrix DSM 17093 chromosome, complete genomeLmbE family protein1e-0757
NC_004193:2522000:254029025402902540961672Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-0755.8
NC_016023:1501553:150608315060831506766684Bacillus coagulans 36D1 chromosome, complete genomeLmbE family protein4e-0652.4
NC_015634:2933712:295056029505602951243684Bacillus coagulans 2-6 chromosome, complete genomeLmbE family protein4e-0652.4