Pre_GI: BLASTP Hits

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Query: NC_007333:537292:552260 Thermobifida fusca YX, complete genome

Start: 552260, End: 554395, Length: 2136

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014165:3559305:3561900356190035639572058Thermobispora bispora DSM 43833 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain-containing protein3e-174612
NC_016111:4245876:4259929425992942620702142Streptomyces cattleya NRRL 8057, complete genomePeptidase3e-163575
NC_003155:3913789:3915360391536039174922133Streptomyces avermitilis MA-4680, complete genomepeptidase1e-162573
NC_003888:5550582:5569564556956455716872124Streptomyces coelicolor A3(2), complete genomepeptidase4e-162572
NC_021177:5419620:5440519544051954426452127Streptomyces fulvissimus DSM 40593, complete genomePeptidase4e-159562
NC_016114:2612465:2612465261246526145912127Streptomyces flavogriseus ATCC 33331 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain-containing protein5e-155548
NC_005125:4062025:4076846407684640790952250Gloeobacter violaceus PCC 7421, complete genomeprobable peptidase2e-112407
NC_006677:1596560:1597291159729115995102220Gluconobacter oxydans 621H, complete genomeDipeptidyl peptidase IV2e-83310
NC_014924:3065430:3077843307784330801132271Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain protein6e-60233
NC_015593:797675:8002968002968025122217Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDipeptidyl-peptidase IV8e-38159
NC_003228:76140:1000961000961022552160Bacteroides fragilis NCTC 9343, complete genomeputative exported dipeptidyl peptidase IV7e-38159
NC_016001:905164:9086289086289107602133Flavobacterium branchiophilum, complete genomeXaa-Pro dipeptidyl-peptidase5e-37156
NC_006347:70607:9244792447946062160Bacteroides fragilis YCH46, complete genomedipeptidyl peptidase IV5e-37156
NC_016776:66223:8806288062902212160Bacteroides fragilis 638R, complete genomeputative exported dipeptidyl peptidase IV5e-37156
NC_009615:2590207:2632704263270426349382235Parabacteroides distasonis ATCC 8503 chromosome, complete genomedipeptidyl aminopeptidase2e-33144
NC_015144:802288:8196718196718218302160Weeksella virosa DSM 16922 chromosome, complete genomedipeptidyl-peptidase IV9e-33142
NC_014933:1023486:1033665103366510358842220Bacteroides helcogenes P 36-108 chromosome, complete genomeprolyl tripeptidyl peptidase3e-31137
NC_016609:5802000:5819633581963358217982166Niastella koreensis GR20-10 chromosome, complete genomedipeptidyl-peptidase IV9e-26119
NC_004663:4137501:4153514415351441557122199Bacteroides thetaiotaomicron VPI-5482, complete genomedipeptidyl peptidase IV4e-24113
NC_004556:1:1381913819162062388Xylella fastidiosa Temecula1, complete genomedipeptidyl-peptidase4e-23110
NC_010577:1:1370113701160882388Xylella fastidiosa M23, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein4e-23110
NC_002488:1:1383913839162262388Xylella fastidiosa 9a5c, complete genomedipeptidyl-peptidase1e-21105
NC_018679:2541986:2563067256306725655622496Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completedipeptidyl peptidase IV1e-21105
NC_015160:4356686:4375911437591143781452235Odoribacter splanchnicus DSM 20712 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain-containing protein5e-1687
NC_014963:4569015:4571371457137145735212151Terriglobus saanensis SP1PR4 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain-containing protein3e-1584.3
NC_004463:2118000:2128328212832821306462319Bradyrhizobium japonicum USDA 110, complete genomeputative peptidase9e-1582.8
NC_016147:2964178:2964178296417829664962319Pseudoxanthomonas spadix BD-a59 chromosome, complete genomedipeptidyl peptidase IV1e-1482.4
NC_017249:8137586:8145187814518781475052319Bradyrhizobium japonicum USDA 6, complete genomepeptidase1e-1482.4
NC_015057:361902:3648663648663674722607Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencepeptidase S9B dipeptidylpeptidase IV domain protein2e-1378.2
NC_013202:149473:1494731494731513261854Halomicrobium mukohataei DSM 12286, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein1e-1172.4
NC_007954:334795:3601663601663621271962Shewanella denitrificans OS217, complete genomepeptidase S9, prolyl oligopeptidase active site region1e-1172
NC_008345:3394154:3394154339415433966222469Shewanella frigidimarina NCIMB 400, complete genomepeptidase S9, prolyl oligopeptidase active site domain protein3e-1170.9
NC_015065:232240:2358182358182376831866Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceWD40-like beta Propeller containing protein4e-1170.5
NC_018691:2810949:2833133283313328350191887Alcanivorax dieselolei B5 chromosome, complete genomePeptidase S9, prolyl oligopeptidase active site region6e-1170.1
NC_012483:3731542:3801098380109838033772280Acidobacterium capsulatum ATCC 51196, complete genomedipeptidyl peptidase, putative1e-1068.9
NC_014761:2248000:2262602226260222644041803Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase s9 prolyl oligopeptidase active site domain protein2e-1068.2
NC_008577:4533574:4533574453357445355591986Shewanella sp. ANA-3 chromosome 1, complete sequencepeptidase S9, prolyl oligopeptidase active site domain protein3e-1067.4
NC_003919:2956404:2973899297389929762442346Xanthomonas axonopodis pv. citri str. 306, complete genomepeptidase4e-1067.4
NC_013222:229190:2635912635912656242034Robiginitalea biformata HTCC2501, complete genomedipeptidyl aminopeptidase5e-1067
NC_014963:3942363:3949538394953839516102073Terriglobus saanensis SP1PR4 chromosome, complete genomeWD40-like beta Propeller containing protein1e-0965.5
NC_010505:5077162:5086907508690750888051899Methylobacterium radiotolerans JCM 2831, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein1e-0965.5
NC_010506:5155951:5163959516395951659171959Shewanella woodyi ATCC 51908, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein2e-0965.1
NC_009142:267550:2884112884112902311821Saccharopolyspora erythraea NRRL 2338, complete genomepeptidase S9, prolyl oligopeptidase active site region2e-0965.1
NC_014623:3503218:3518231351823135201681938Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase, s9 prolyl oligopeptidase2e-0965.1
NC_013861:3659094:3660956366095636629501995Legionella longbeachae NSW150, complete genomeprolyl oligopeptidase3e-0964.7
NC_014761:743113:7477617477617496531893Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase s9 prolyl oligopeptidase active site domain protein2e-0964.7
NC_014964:2272413:2295419229541922972121794Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepeptidase S9 prolyl oligopeptidase2e-0964.7
NC_009092:261778:2755742755742776522079Shewanella loihica PV-4, complete genomepeptidase S9, prolyl oligopeptidase active site domain protein3e-0964.3
NC_004193:375416:4882514882514900471797Oceanobacillus iheyensis HTE831, complete genomeacylamino-acid-releasing enzyme4e-0963.9
NC_013524:392089:3958763958763978101935Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein5e-0963.5
NC_013923:45876:4936349363512281866Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequencepeptidase S9 prolyl oligopeptidase active site domain protein6e-0963.2
NC_015379:6226661:6263406626340662652351830Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative peptidase9e-0962.8
NC_006624:324267:3485733485733504231851Thermococcus kodakarensis KOD1, complete genomeprolyl endopeptidase1e-0862
NC_009614:978506:1005443100544310064801038Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-0862
NC_010407:1775227:1776142177614217781331992Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative peptidase2e-0861.6
NC_015167:3652015:3652015365201536545402526Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S9B dipeptidylpeptidase IV domain-containing protein2e-0861.6
NC_015954:2405527:2425867242586724277651899Halophilic archaeon DL31 chromosome, complete genomepeptidase S9 prolyl oligopeptidase active site domain-containing protein2e-0861.6
NC_014479:3079855:3099529309952931015021974Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative acylaminoacyl-peptidase2e-0861.6
NC_014761:2189500:2211198221119822130001803Oceanithermus profundus DSM 14977 chromosome, complete genomepeptidase s9, prolyl oligopeptidase active site region3e-0861.2
NC_011831:1693935:1695572169557216976052034Chloroflexus aggregans DSM 9485, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein2e-0861.2
NC_012997:4152938:4169054416905441710181965Teredinibacter turnerae T7901, complete genomeputative dipeptidyl anminopeptidase3e-0860.8
NC_004369:371109:3856223856223876762055Corynebacterium efficiens YS-314, complete genomeputative peptidase9e-0859.3
NC_008700:2451798:2460445246044524623551911Shewanella amazonensis SB2B, complete genomeprolyl oligopeptidase family protein9e-0859.3
NC_015510:1012195:1014822101482210169812160Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomepeptidase S9 prolyl oligopeptidase active site domain-containing protein2e-0758.5
NC_014537:2254061:2254061225406122559801920Vulcanisaeta distributa DSM 14429 chromosome, complete genomepeptidase S9 prolyl oligopeptidase active site domain-containing protein3e-0757.8
NC_015711:3193774:3199161319916132011972037Myxococcus fulvus HW-1 chromosome, complete genomeS9C family peptidase4e-0757.4
NC_008700:367949:3899883899883919371950Shewanella amazonensis SB2B, complete genomeprolyl oligopeptidase family protein4e-0757
NC_002754:1269463:1271424127142412730341611Sulfolobus solfataricus P2, complete genomeAcylaminoacyl-peptidase, putative (apeH-1)6e-0756.6
NC_019673:7400817:7408941740894174108901950Saccharothrix espanaensis DSM 44229 complete genomePeptidase S9, prolyl oligopeptidase2e-0655.5
NC_015680:1562535:1562535156253515644271893Pyrococcus yayanosii CH1 chromosome, complete genomeacylamino acid-releasing enzyme1e-0655.5
NC_014655:2874640:2874640287464028770482409Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein2e-0654.7
NC_016114:1:1778317783197621980Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacylaminoacyl peptidase2e-0654.7
NC_018524:4599809:4634608463460846365121905Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomealpha/beta hydrolase fold family protein4e-0653.9
NC_013730:778076:7970657970657995542490Spirosoma linguale DSM 74, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein4e-0653.9
NC_013159:2098500:2114017211401721159421926Saccharomonospora viridis DSM 43017, complete genomedipeptidyl aminopeptidase/acylaminoacyl peptidase4e-0653.9
NC_009484:857384:8573848573848593091926Acidiphilium cryptum JF-5 chromosome, complete genomepeptidase S9 prolyl oligopeptidase5e-0653.5
NC_015953:6212366:6234679623467962365681890Streptomyces sp. SirexAA-E chromosome, complete genomepeptidase S9 prolyl oligopeptidase active site domain-containing protein7e-0653.1