Pre_GI: BLASTP Hits

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Query: NC_007333:537292:540771 Thermobifida fusca YX, complete genome

Start: 540771, End: 543254, Length: 2484

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014165:3559305:3581352358135235838022451Thermobispora bispora DSM 43833 chromosome, complete genomeAAA ATPase01242
NC_017201:93500:1039861039861065262541Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,hypothetical protein4e-65249
NC_007103:230872:2354912354912380312541Bacillus cereus E33L plasmid pE33L466, complete sequencehypothetical protein6e-65249
NC_009089:428075:4447374447374471872451Clostridium difficile 630, complete genomeconjugative transposon protein1e-59231
NC_002758:434462:4461504461504486032454Staphylococcus aureus subsp. aureus Mu50, complete genomeputative ATP/GTP-binding protein2e-59231
NC_017347:424500:4333184333184357712454Staphylococcus aureus subsp. aureus T0131 chromosome, completeConjugative transposon ATP/GTP-binding protein1e-58228
NC_009089:3935500:3954969395496939574192451Clostridium difficile 630, complete genomeconjugative transposon protein4e-58227
NC_009089:3889811:3901806390180639042592454Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein5e-58226
NC_017341:428500:4369804369804394332454Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative ATP/GTP-binding protein1e-57225
NC_013316:4095905:4111313411131341137452433Clostridium difficile R20291, complete genomeconjugative transposon protein5e-57223
NC_013315:4015119:4030527403052740329592433Clostridium difficile CD196 chromosome, complete genomeconjugative transposon protein5e-57223
NC_017179:4023139:4038547403854740409792433Clostridium difficile BI1, complete genomeconjugative transposon protein5e-57223
NC_013798:1778758:1778758177875817812052448Streptococcus gallolyticus UCN34, complete genomeTn916 conserved hypothetical protein2e-55218
NC_021175:1597613:1597613159761316000602448Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-55218
NC_009089:581655:5905605905605930072448Clostridium difficile 630, complete genomeconjugative transposon ATP/GTP-binding protein3e-55217
NC_004668:2198027:2201166220116622036132448Enterococcus faecalis V583, complete genomehypothetical protein3e-55217
NC_016630:1247251:1257476125747612599232448Filifactor alocis ATCC 35896 chromosome, complete genomeATP/GTP-binding protein1e-54215
NC_017093:8407968:8412923841292384164413519Actinoplanes missouriensis 431, complete genomehypothetical protein2e-53211
NC_014830:13179:3101431014335302517Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein2e-50201
NC_013895:1332832:1362068136206813634021335Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete9e-41169
CP002207:1:94079407118002394Bacillus atrophaeus 1942, complete genomehypothetical protein3e-38160
NC_014639:1:94079407118002394Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein3e-38160
NC_000964:521975:5382955382955407902496Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-37158
NC_017347:2724313:2733214273321427357092496Staphylococcus aureus subsp. aureus T0131 chromosome, completeVirB42e-35151
NC_019673:967559:9853599853599882262868Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-35151
NC_002952:1349006:1357767135776713602622496Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein5e-35150
NC_007793:1633080:1637380163738016398752496Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein5e-35150
NC_009848:582775:6087866087866112422457Bacillus pumilus SAFR-032, complete genomehypothetical protein2e-33144
NC_017199:31500:5144051440540222583Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28,hypothetical protein5e-32140
NC_015573:2463123:2464561246456124663871827Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein4e-31137
NC_014172:100718:109709109709110587879Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequencehypothetical protein4e-30133
NC_013450:45782:6109061090635852496Staphylococcus aureus subsp. aureus ED98, complete genometransposon-related protein1e-29132
NC_009253:829913:8504438504438528602418Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein8e-30132
NC_017167:1648913:1690380169038016928632484Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein9e-29129
NC_014172:100718:1053321053321068671536Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequencehypothetical protein1e-28129
NC_017167:2298962:2298962229896223014482487Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein4e-28127
NC_013205:1187812:1209421120942112119012481Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,hypothetical protein4e-27124
NC_007644:280000:3108643108643132872424Moorella thermoacetica ATCC 39073, complete genomehypothetical protein2e-27124
NC_008269:667228:6672286672286702633036Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein1e-1895.9
NC_004669:24672:2467224672271642493Enterococcus faecalis V583 plasmid pTEF1, complete sequencehypothetical protein6e-1893.6
NC_013235:682902:7017777017777045392763Nakamurella multipartita DSM 44233, complete genomehypothetical protein6e-1376.6
NC_009339:274428:2914352914352938912457Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencehypothetical protein4e-0653.9