Pre_GI: BLASTP Hits

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Query: NC_007333:39579:70512 Thermobifida fusca YX, complete genome

Start: 70512, End: 71909, Length: 1398

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015676:1417456:1435753143575314371381386Methanosalsum zhilinae DSM 4017 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-113409
NC_013743:1045488:1059392105939210607891398Haloterrigena turkmenica DSM 5511, complete genomeFAD linked oxidase domain protein5e-74278
NC_013743:1045488:1064476106447610659091434Haloterrigena turkmenica DSM 5511, complete genomeFAD linked oxidase domain protein3e-68259
NC_007777:1296000:1296262129626212976981437Frankia sp. CcI3, complete genomeFAD linked oxidase-like9e-63241
NC_013947:3534209:3539213353921335405591347Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-54214
NC_017904:1725180:1728634172863417300521419Mycobacterium sp. MOTT36Y chromosome, complete genomeFAD linked oxidase domain-containing protein4e-43176
NC_013172:542896:5445505445505459591410Brachybacterium faecium DSM 4810, complete genomeFAD/FMN-dependent dehydrogenase7e-42171
NC_009495:280000:2814312814312827621332Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeFAD-binding protein2e-41170
NC_016631:3245501:3257293325729332586541362Granulicella mallensis MP5ACTX8 chromosome, complete genome(R)-6-hydroxynicotine oxidase2e-39164
NC_011894:4013830:4020314402031440216601347Methylobacterium nodulans ORS 2060, complete genomeFAD linked oxidase domain protein4e-34145
NC_003888:4523500:4547977454797745495601584Streptomyces coelicolor A3(2), complete genomelipoprotein7e-32138
NC_020410:495184:5199815199815213271347Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completespore coat protein; putative oxidoreductase3e-31136
NC_009725:496443:5358995358995372451347Bacillus amyloliquefaciens FZB42, complete genomeYvdP5e-31135
NC_017191:467207:4942354942354955811347Bacillus amyloliquefaciens XH7 chromosome, complete genomespore coat protein; putative oxidoreductase9e-31135
NC_017190:466236:4866764866764880221347Bacillus amyloliquefaciens LL3 chromosome, complete genomelipoprotein CotQ9e-31135
NC_017188:461177:4882134882134895591347Bacillus amyloliquefaciens TA208 chromosome, complete genomelipoprotein CotQ9e-31135
NC_020272:3396800:3409736340973634110821347Bacillus amyloliquefaciens IT-45, complete genomeFAD-binding protein9e-31135
NC_010180:213825:2159572159572172941338Bacillus weihenstephanensis KBAB4 plasmid pBWB401, completeFAD linked oxidase domain protein1e-30134
NC_014551:483773:5007415007415020871347Bacillus amyloliquefaciens DSM 7, complete genomelipoprotein CotQ2e-30133
NC_016114:7282882:7314302731430273157381437Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeFAD linked oxidase domain-containing protein9e-30131
NC_010505:5077162:5112256511225651136441389Methylobacterium radiotolerans JCM 2831, complete genomeFAD linked oxidase domain protein8e-30131
NC_015312:61752:7718877188785431356Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeFAD linked oxidase domain-containing protein3e-29129
NC_008705:1537080:1543663154366315450511389Mycobacterium sp. KMS, complete genomeFAD linked oxidase domain protein9e-29128
NC_008146:1535827:1539355153935515407431389Mycobacterium sp. MCS, complete genomeFAD linked oxidase-like protein9e-29128
NC_013530:423540:4431224431224453832262Xylanimonas cellulosilytica DSM 15894, complete genomeFAD linked oxidase domain protein2e-26120
NC_009953:2808288:2808288280828828097181431Salinispora arenicola CNS-205 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-23111
NC_008228:4696338:4712685471268547141541470Pseudoalteromonas atlantica T6c, complete genomeTwin-arginine translocation pathway signal5e-23109
NC_011983:1746000:1758022175802217595991578Agrobacterium radiobacter K84 chromosome 2, complete genomeFAD-dependent oxidoreductase protein4e-22106
NC_004578:2671508:2687499268749926889141416Pseudomonas syringae pv. tomato str. DC3000, complete genomeoxidoreductase, FAD-binding, putative3e-20100
NC_019842:484933:5279375279375290101074Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-1995.5
NC_019902:1681320:1686691168669116880521362Thioalkalivibrio nitratireducens DSM 14787, complete genomeFAD linked oxidase-like protein9e-1478.6
NC_015259:2757081:2759202275920227605571356Polymorphum gilvum SL003B-26A1 chromosome, complete genomeFAD linked oxidase-like protein3e-1377
NC_013757:1888850:1896300189630018976251326Geodermatophilus obscurus DSM 43160, complete genomeFAD linked oxidase domain protein2e-1273.9
NC_010634:1755548:1762714176271417651312418Yersinia pseudotuberculosis PB1/+, complete genomeFAD linked oxidase domain-containing protein6e-1272.8
NC_006155:1756000:1762466176246617648832418Yersinia pseudotuberculosis IP 32953, complete genomeputative oxidoreductase6e-1272.8
NC_010465:2820500:2867365286736528697822418Yersinia pseudotuberculosis YPIII, complete genomeFAD linked oxidase domain protein6e-1272.8
NC_005810:1467772:1471979147197914744082430Yersinia pestis biovar Microtus str. 91001, complete genomeputative oxidoreductase5e-1272.8
NC_010159:3120642:3125242312524231276592418Yersinia pestis Angola, complete genomeFAD binding domain protein5e-1272.8
NC_008149:2802392:2838205283820528406222418Yersinia pestis Nepal516, complete genomeoxidoreductase5e-1272.8
NC_003143:1630000:1643068164306816454852418Yersinia pestis CO92, complete genomeputative oxidoreductase5e-1272.8
NC_008150:844727:8549738549738573902418Yersinia pestis Antiqua, complete genomeputative oxidoreductase5e-1272.8
NC_014029:1702338:1712584171258417150012418Yersinia pestis Z176003 chromosome, complete genomeputative oxidoreductase5e-1272.8
NC_017154:1644404:1654651165465116570682418Yersinia pestis D106004 chromosome, complete genomeputative oxidoreductase5e-1272.8
NC_017160:1628500:1635146163514616375632418Yersinia pestis D182038 chromosome, complete genomeputative oxidoreductase5e-1272.8
NC_017168:3977767:4013498401349840159152418Yersinia pestis A1122 chromosome, complete genomeputative oxidoreductase5e-1272.8
NC_009664:10718:1414614146155161371Kineococcus radiotolerans SRS30216, complete genomeFAD linked oxidase domain protein5e-1272.8
NC_019673:2051363:2065046206504620662751230Saccharothrix espanaensis DSM 44229 complete genomeputative oxidoreductase8e-1168.9
NC_016609:4181654:4187204418720441890451842Niastella koreensis GR20-10 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-1067.8
NC_008025:669281:6692816692816707291449Deinococcus geothermalis DSM 11300, complete genomeFAD linked oxidase-like protein9e-1065.1
NC_015387:1002955:1017029101702910183751347Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeD-lactate dehydrogenase (cytochrome)4e-0963.2
NC_014831:2082304:2110694211069421126761983Thermaerobacter marianensis DSM 12885 chromosome, complete genomeFAD linked oxidase domain protein5e-0962.8
NC_013159:148180:1511371511371524981362Saccharomonospora viridis DSM 43017, complete genomeFAD/FMN-dependent dehydrogenase8e-0962.4
NC_008786:18688:3591335913373251413Verminephrobacter eiseniae EF01-2, complete genomeFAD linked oxidase domain protein7e-0962.4
NC_017275:2615814:2633123263312326361253003Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-0861.6
NC_012623:2774910:2790237279023727932393003Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-0861.6
NC_012632:2654200:2670471267047126734733003Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-0861.6
NC_012726:2549813:2564717256471725677193003Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD linked oxidase domain-containing protein1e-0861.6
NC_012589:2698556:2714345271434527173473003Sulfolobus islandicus L.S.2.15, complete genomeFAD linked oxidase domain protein2e-0861.2
NC_013769:2685000:2700105270010527031073003Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0861.2
NC_002754:1968668:1986907198690719899093003Sulfolobus solfataricus P2, complete genomeDehydrogenase, putative2e-0861.2
NC_017276:2481083:2500916250091625039183003Sulfolobus islandicus REY15A chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0861.2
NC_009440:1045882:1045882104588210472401359Metallosphaera sedula DSM 5348 chromosome, complete genomeD-lactate dehydrogenase2e-0860.8
NC_015499:1466794:1475394147539414768001407Thermodesulfobium narugense DSM 14796 chromosome, complete genomeD-lactate dehydrogenase (cytochrome)2e-0860.5
NC_006510:2044347:2059856205985620612651410Geobacillus kaustophilus HTA426, complete genomeglycolate oxidase subunit4e-0860.1
NC_014831:2082304:2093372209337220947511380Thermaerobacter marianensis DSM 12885 chromosome, complete genomeFAD linked oxidase domain protein7e-0858.9
NC_014206:3391352:3405264340526434066251362Geobacillus sp. C56-T3 chromosome, complete genomeFAD linked oxidase2e-0757.4
NC_007347:3612918:362694436269443627276333Ralstonia eutropha JMP134 chromosome 1, complete sequenceprobable oxidoreductase1e-0654.7
NC_013209:2384826:2384826238482623862531428Acetobacter pasteurianus IFO 3283-01, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017100:2383487:2386033238603323874601428Acetobacter pasteurianus IFO 3283-03, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017108:2383370:2383370238337023847971428Acetobacter pasteurianus IFO 3283-12, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017111:2383388:2383388238338823848151428Acetobacter pasteurianus IFO 3283-32, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017121:2383375:2383375238337523848021428Acetobacter pasteurianus IFO 3283-07, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017125:2383467:2386013238601323874401428Acetobacter pasteurianus IFO 3283-22, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017146:2383509:2386055238605523874821428Acetobacter pasteurianus IFO 3283-26, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_017150:2290681:2292572229257222939991428Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-Lactate dehydrogenase2e-0654.3
NC_020126:7896447:7896447789644778983421896Myxococcus stipitatus DSM 14675, complete genomeFAD linked oxidase2e-0653.9
NC_008699:2294361:2303931230393123052861356Nocardioides sp. JS614, complete genomeD-lactate dehydrogenase (cytochrome)2e-0653.9
NC_008278:5012000:5029673502967350313041632Frankia alni ACN14a, complete genomeputative secreted FAD-linked oxidase3e-0653.5
NC_010674:370629:3706293706293720321404Clostridium botulinum B str. Eklund 17B, complete genomeFAD/FMN-containing dehydrogenase4e-0653.1
NC_007503:1111457:1155204115520411565801377Carboxydothermus hydrogenoformans Z-2901, complete genomeglycolate oxidase, GlcD subunit5e-0652.8
NC_015733:3736104:3783876378387637853751500Pseudomonas putida S16 chromosome, complete genomeglycolate oxidase, GlcD subunit5e-0652.8
NC_015733:3595882:3617787361778736192861500Pseudomonas putida S16 chromosome, complete genomeglycolate oxidase, GlcD subunit6e-0652.8
NC_015563:6357653:6369485636948563707921308Delftia sp. Cs1-4 chromosome, complete genomeFAD linked oxidase domain-containing protein6e-0652.8
NC_008595:1349579:1370245137024513716121368Mycobacterium avium 104, complete genomeoxidoreductase, FAD-binding8e-0652