Pre_GI: BLASTP Hits

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Query: NC_007333:39579:67652 Thermobifida fusca YX, complete genome

Start: 67652, End: 68626, Length: 975

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014158:1479313:148475314847531485730978Tsukamurella paurometabola DSM 20162 chromosome, complete genomeagmatinase7e-107387
NC_009142:6729512:675260267526026753543942Saccharopolyspora erythraea NRRL 2338, complete genomeagmatinase7e-104377
NC_018643:857911:891418891418892377960Alpha proteobacterium HIMB5 chromosome, complete genomeagmatinase2e-101369
NC_009338:817854:8178548178548188671014Mycobacterium gilvum PYR-GCK chromosome, complete genomeputative agmatinase6e-97354
NC_014915:1909275:195329219532921954266975Geobacillus sp. Y412MC52 chromosome, complete genomeagmatinase3e-75281
NC_020210:1275031:131217413121741313139966Geobacillus sp. GHH01, complete genomeguanidinobutyrase6e-73274
NC_012856:2266187:228480422848042285763960Ralstonia pickettii 12D chromosome 1, complete genomeagmatinase4e-72271
NC_015276:2948923:296873529687352969691957Marinomonas mediterranea MMB-1 chromosome, complete genomeagmatinase1e-70266
NC_016612:28451:616866168662636951Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-65250
NC_010676:2621496:262378126237812624755975Burkholderia phytofirmans PsJN chromosome 2, complete sequenceagmatinase3e-63242
NC_011958:923789:923789923789924751963Rhodobacter sphaeroides KD131 chromosome 2, complete genomeAgmatinase3e-62238
NC_007494:867901:868720868720869682963Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative agmatinase1e-61237
NC_007348:2519447:253275325327532533727975Ralstonia eutropha JMP134 chromosome 2, complete sequencePutative agmatinase1e-61236
NC_005126:4333767:433474343347434335678936Photorhabdus luminescens subsp. laumondii TTO1, complete genomeagmatinase1e-47190
NC_009712:2092440:211066021106602111634975Candidatus Methanoregula boonei 6A8, complete genomeputative agmatinase1e-45183
NC_010184:5120359:513921351392135140085873Bacillus weihenstephanensis KBAB4, complete genomeputative agmatinase3e-44179
NC_020244:3681236:369081036908103691682873Bacillus subtilis XF-1, complete genomeagmatinase9e-42171
NC_009725:3559257:357043635704363571308873Bacillus amyloliquefaciens FZB42, complete genomeSpeB3e-41169
NC_019842:3594409:360558936055893606461873Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,agmatinase7e-41167
NC_020410:3547345:356447335644733565345873Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeagmatinase1e-40167
NC_014666:7222000:7223404722340472245041101Frankia sp. EuI1c chromosome, complete genomeagmatinase8e-40164
NC_010718:2977021:2980253298025329812541002Natranaerobius thermophilus JW/NM-WN-LF, complete genomeagmatinase2e-39163
NC_014964:1169925:118626111862611187127867Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeagmatinase9e-38157
NC_014538:1311500:131297713129771313843867Thermoanaerobacter sp. X513 chromosome, complete genomeagmatinase9e-38157
NC_010320:1585974:160053916005391601405867Thermoanaerobacter sp. X514 chromosome, complete genomeputative agmatinase9e-38157
NC_010321:1177238:119407011940701194936867Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeputative agmatinase9e-38157
NC_013894:672840:6819136819136830071095Thermocrinis albus DSM 14484 chromosome, complete genomeArginase/agmatinase/formiminoglutamase8e-38157
NC_006177:12383:283132831329194882Symbiobacterium thermophilum IAM 14863, complete genomearginase-family protein2e-37156
NC_015588:2468207:2473514247351424747191206Isoptericola variabilis 225 chromosome, complete genomeagmatinase2e-37156
NC_009142:6729512:6749960674996067509611002Saccharopolyspora erythraea NRRL 2338, complete genomeagmatinase, putative2e-36153
NC_019892:5368096:5383308538330853846091302Singulisphaera acidiphila DSM 18658 chromosome, complete genomearginase family hydrolase3e-36152
NC_012622:1579927:160055716005571601450894Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeagmatinase1e-35150
NC_015565:1163148:1172838117283811739441107Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeAgmatinase2e-35149
NC_013156:127000:137812137812138666855Methanocaldococcus fervens AG86, complete genomeagmatinase2e-35149
NC_015565:1163148:1167900116790011690031104Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeAgmatinase2e-34146
NC_015275:1573916:157624115762411577098858Clostridium lentocellum DSM 5427 chromosome, complete genomeagmatinase3e-34145
NC_015588:2468207:2474766247476624759921227Isoptericola variabilis 225 chromosome, complete genomeagmatinase5e-34145
NC_009253:529494:530341530341531207867Desulfotomaculum reducens MI-1 chromosome, complete genomeputative agmatinase1e-33144
NC_010163:1361217:137364713736471374516870Acholeplasma laidlawii PG-8A chromosome, complete genomeputative agmatinase2e-33142
NC_020134:1941523:195930419593041960155852Clostridium stercorarium subsp. stercorarium DSM 8532, completeagmatinase SpeB2e-33142
NC_013222:1898164:190357519035751904357783Robiginitalea biformata HTCC2501, complete genomearginase6e-33141
NC_009482:2109270:212653421265342127403870Synechococcus sp. RCC307 chromosome, complete genomeagmatinase1e-32140
NC_008820:2595500:261008926100892611003915Prochlorococcus marinus str. MIT 9303, complete genomeArginase family protein3e-32139
NC_015172:951550:9583969583969594091014Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeagmatinase6e-31135
NC_009051:930758:949272949272950123852Methanoculleus marisnigri JR1, complete genomeputative agmatinase9e-31134
NC_007516:2383097:240316724031672404042876Synechococcus sp. CC9605, complete genomeagmatinase, putative1e-30133
NC_009091:1598044:160312916031291604010882Prochlorococcus marinus str. MIT 9301, complete genomeArginase family9e-30130
NC_013744:300000:3076783076783086851008Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeArginase/agmatinase/formiminoglutamase3e-29129
NC_013791:1152500:115250011525001153441942Bacillus pseudofirmus OF4 chromosome, complete genomeagmatinase2e-28126
NC_005070:2308363:232620623262062327066861Synechococcus sp. WH 8102, complete genomearginase family protein2e-28126
NC_014471:1269571:129319012931901294125936Ignisphaera aggregans DSM 17230 chromosome, complete genomeagmatinase4e-28125
NC_018876:1551155:156120715612071562076870Methanolobus psychrophilus R15 chromosome, complete genomeagmatinase7e-28124
NC_013740:2218215:221876322187632219746984Acidaminococcus fermentans DSM 20731, complete genomeArginase/agmatinase/formiminoglutamase1e-26120
NC_011661:1411383:142796814279681428855888Dictyoglomus turgidum DSM 6724, complete genomeagmatinase7e-26118
NC_014729:1367862:136691513669151367865951Halogeometricum borinquense DSM 11551 chromosome, complete genomeformiminoglutamase7e-25114
NC_011297:1224749:124769412476941248587894Dictyoglomus thermophilum H-6-12, complete genomeagmatinase4e-24112
NC_009376:1633283:163597016359701636776807Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeagmatinase2e-23110
NC_014729:630152:662638662638663486849Halogeometricum borinquense DSM 11551 chromosome, complete genomeagmatinase2e-23110
NC_016885:603269:616146616146617000855Pyrobaculum oguniense TE7 chromosome, complete genomearginase/agmatinase/formimionoglutamate hydrolase6e-23108
NC_012581:803456:827115827115828086972Bacillus anthracis str. CDC 684 chromosome, complete genomeformimidoylglutamase8e-23107
NC_016779:3418538:342260634226063423577972Bacillus cereus F837/76 chromosome, complete genomeFormiminoglutamase8e-23107
NC_009483:2640403:2723717272371727247421026Geobacter uraniireducens Rf4 chromosome, complete genomearginase/agmatinase/formiminoglutamase1e-22107
NC_009376:1335074:133931113393111340114804Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomearginase/agmatinase/formiminoglutamase4e-22105
NC_003296:1980687:198068719806871981643957Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE AGMATINASE PROTEIN5e-22105
NC_014551:3797047:381859538185953819545951Bacillus amyloliquefaciens DSM 7, complete genomeformiminoglutamate hydrolase2e-21103
NC_017188:3764061:378679637867963787746951Bacillus amyloliquefaciens TA208 chromosome, complete genomeformimidoylglutamase2e-21103
NC_017190:3812065:383361738336173834567951Bacillus amyloliquefaciens LL3 chromosome, complete genomeformiminoglutamate hydrolase2e-21103
NC_017191:3766960:378848837884883789438951Bacillus amyloliquefaciens XH7 chromosome, complete genomeformimidoylglutamase2e-21103
NC_007645:3756654:376136137613613762302942Hahella chejuensis KCTC 2396, complete genomeArginase/agmatinase/formimionoglutamate hydrolase, arginase family2e-21103
NC_015152:1602412:162227516222751623132858Spirochaeta sp. Buddy chromosome, complete genomeagmatinase7e-2098.2
NC_008576:4467745:447574944757494476639891Magnetococcus sp. MC-1, complete genomeputative agmatinase7e-2098.2
NC_016645:985802:9997159997151000455741Pyrobaculum sp. 1860 chromosome, complete genomeArginase/agmatinase/formiminoglutamase6e-1995.1
NC_014838:254322:277708277708278595888Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceArginase/agmatinase/formiminoglutamase6e-1995.1
NC_013222:432947:435743435743436615873Robiginitalea biformata HTCC2501, complete genomearginase6e-1995.1
NC_011567:139598:150895150895151791897Anoxybacillus flavithermus WK1, complete genomeArginase2e-1893.6
NC_014484:371500:373945373945374820876Spirochaeta thermophila DSM 6192 chromosome, complete genomeputative agmatinase3e-1893.2
NC_007760:2897409:2915968291596829169931026Anaeromyxobacter dehalogenans 2CP-C, complete genomeArginase/agmatinase/formiminoglutamase2e-1790.1
NC_013744:349297:370328370328371326999Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeformiminoglutamase4e-1789
NC_010718:237962:245424245424246317894Natranaerobius thermophilus JW/NM-WN-LF, complete genomearginase9e-1787.8
NC_016070:1380500:140238914023891403039651Thermoproteus tenax Kra 1, complete genomeagmatinase1e-1584
NC_012029:904780:934055934055934960906Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomearginase4e-1582.4
NC_010172:573046:594996594996595922927Methylobacterium extorquens PA1, complete genomearginase4e-1582.4
NC_015321:4142843:4159547415954741605991053Fluviicola taffensis DSM 16823 chromosome, complete genomeAgmatinase5e-1582
NC_017208:108134:161835161835162728894Bacillus thuringiensis serovar chinensis CT-43 chromosome, completearginase7e-1581.6
NC_014171:109280:160072160072160965894Bacillus thuringiensis BMB171 chromosome, complete genomearginase7e-1581.6
NC_017191:3841170:386130338613033862193891Bacillus amyloliquefaciens XH7 chromosome, complete genomearginase1e-1480.9
NC_017188:3839478:385961138596113860501891Bacillus amyloliquefaciens TA208 chromosome, complete genomearginase1e-1480.9
NC_020410:3801583:382307538230753823965891Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completearginase2e-1480.5
NC_019842:3852062:387450938745093875399891Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,arginase2e-1480.5
NC_009725:3809403:383147838314783832368891Bacillus amyloliquefaciens FZB42, complete genomeRocF2e-1480.5
NC_020272:84227:857018570186591891Bacillus amyloliquefaciens IT-45, complete genomearginase2e-1480.1
NC_010830:1451887:1470391147039114714341044Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1479.3
NC_017195:3919000:394635839463583947248891Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completearginase1e-1377.4
NC_014976:2117567:213937221393722140262891Bacillus subtilis BSn5 chromosome, complete genomearginase1e-1377.4
NC_020244:3961337:398607039860703986960891Bacillus subtilis XF-1, complete genomearginase1e-1377.4
NC_015589:3852217:387109338710933871992900Desulfotomaculum ruminis DSM 2154 chromosome, complete genomearginase1e-1377.4
UCMB5137:3601629:362384236238423624732891Bacillus atrophaeus UCMB-5137arginase2e-1376.6
NC_002951:2208813:222541622254162226324909Staphylococcus aureus subsp. aureus COL, complete genomearginase3e-1376.3
NC_017341:2303005:231961023196102320518909Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,arginase3e-1376.3
NC_014958:629459:652456652456653340885Deinococcus maricopensis DSM 21211 chromosome, complete genomearginase5e-1375.5
NC_015318:1583839:159577615957761596714939Hippea maritima DSM 10411 chromosome, complete genomeFormimidoylglutamase6e-1375.1
NC_014479:3939183:396426339642633965153891Bacillus subtilis subsp. spizizenii str. W23 chromosome, completearginase7e-1375.1
NC_016047:4108910:413750341375034138393891Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completearginase9e-1374.7
NC_010162:9641549:9642987964298796441051119Sorangium cellulosum 'So ce 56', complete genomearginase1e-1273.9
NC_015732:982774:985027985027985935909Spirochaeta caldaria DSM 7334 chromosome, complete genomearginase5e-1272
NC_014328:2326930:2332029233202923330481020Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeformiminoglutamase2e-1170.1
NC_012673:1540000:154791515479151548817903Exiguobacterium sp. AT1b, complete genomearginase6e-1168.6
NC_010943:325739:341542341542342462921Stenotrophomonas maltophilia K279a, complete genomeputative arginase1e-1067.8
NC_010556:141374:153056153056153964909Exiguobacterium sibiricum 255-15, complete genomearginase1e-1067.4
NC_018665:139646:153006153006153914909Exiguobacterium antarcticum B7 chromosome, complete genomeArginase2e-1067
NC_015947:280095:297551297551298471921Burkholderia sp. JV3 chromosome, complete genomearginase3e-1065.9
NC_016043:1603499:161362016136201614531912Taylorella asinigenitalis MCE3 chromosome, complete genomearginase4e-1065.9
NC_015186:2165628:216618921661892167148960Acidiphilium multivorum AIU301, complete genomearginase1e-0964.3
NC_014307:3240430:325233132523313253260930Ralstonia solanacearum CFBP2957 chromosome, complete genomearginase2e-0963.9
NC_014034:2253649:227286122728612273790930Rhodobacter capsulatus SB1003 chromosome, complete genomearginase3e-0962.8
NC_006396:320853:338707338707339654948Haloarcula marismortui ATCC 43049 chromosome I, complete sequencearginase4e-0962.4
NC_007296:1762000:177588417758841776879996Streptococcus pyogenes MGAS6180, complete genomeformiminoglutamase6e-0961.6
NC_016628:1:9343934310266924Vibrio furnissii NCTC 11218 chromosome 2, complete sequencearginase/agmatinase/formimionoglutamate hydrolase1e-0860.8
NC_017347:2437902:245408924540892455024936Staphylococcus aureus subsp. aureus T0131 chromosome, completeFormimidoylglutamase6e-0858.5
NC_003308:1:272512725128225975Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencearginase1e-0757.8
NC_003065:27163:606546065461628975Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencearginase1e-0757.8
NC_013922:799186:8189118189118199661056Natrialba magadii ATCC 43099 chromosome, complete genomearginase2e-0757
NC_020302:1241504:126377512637751264743969Corynebacterium halotolerans YIM 70093 = DSM 44683, completeformimidoylglutamase8e-0754.7
NC_014532:1713987:171742017174201718361942Halomonas elongata DSM 2581, complete genomeformimidoylglutamase1e-0654.3
NC_010336:1335558:133918013391801340049870Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein3e-0652.8
NC_015675:6342164:636158163615816362501921Mesorhizobium opportunistum WSM2075 chromosome, complete genomearginase7e-0651.6
NC_019973:5716453:573587057358705736790921Mesorhizobium australicum WSM2073, complete genomearginase7e-0651.6
NC_014923:5787493:580691058069105807830921Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completearginase7e-0651.6