Pre_GI: BLASTP Hits

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Query: NC_007333:3360000:3367245 Thermobifida fusca YX, complete genome

Start: 3367245, End: 3368858, Length: 1614

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013159:1225866:1246297124629712478951599Saccharomonospora viridis DSM 43017, complete genomeSSS sodium solute transporter1e-172607
NC_015673:397947:4115874115874132031617Corynebacterium resistens DSM 45100 chromosome, complete genomemonocarboxylic acid transporter3e-136485
NC_010545:1781393:1781393178139317830001608Corynebacterium urealyticum DSM 7109, complete genomeputative transporter5e-129461
NC_016786:720000:7204347204347220861653Corynebacterium diphtheriae HC01 chromosome, complete genomemonocarboxylic acid transporter2e-126453
NC_016782:720000:7204657204657221171653Corynebacterium diphtheriae 241 chromosome, complete genomemonocarboxylic acid transporter2e-126453
NC_016787:733685:7340307340307356821653Corynebacterium diphtheriae HC03 chromosome, complete genomemonocarboxylic acid transporter2e-126452
NC_005957:1549201:1574152157415215757021551Bacillus thuringiensis serovar konkukian str. 97-27, completesodium/solute symporter family protein; possible sodium/proline symporter4e-88326
NC_012659:1522960:1547902154790215494521551Bacillus anthracis str. A0248, complete genomesodium/solute symporter family protein5e-88325
NC_011773:1590560:1615511161551116170611551Bacillus cereus AH820 chromosome, complete genomesodium/solute symporter family protein5e-88325
NC_003997:1522937:1547879154787915494291551Bacillus anthracis str. Ames, complete genomesodium/solute symporter family protein5e-88325
NC_007530:1523060:1548002154800215495521551Bacillus anthracis str. 'Ames Ancestor', complete genomesodium/solute symporter family protein5e-88325
NC_005945:1523014:1547956154795615495061551Bacillus anthracis str. Sterne, complete genomesodium/solute symporter family protein5e-88325
NC_008463:1912348:1945934194593419475891656Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/proline:solute symporter2e-78293
NC_008570:2216736:2260336226033622619911656Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecation/acetate symporter ActP1e-76287
NC_011094:4361238:4402069440206944037181650Salmonella enterica subsp. enterica serovar Schwarzengrund stracetate permease4e-75282
NC_009659:997779:1019745101974510212711527Janthinobacterium sp. Marseille chromosome, complete genomesodium/solute symporter family protein4e-70266
NC_007948:517893:5301315301315316571527Polaromonas sp. JS666, complete genomeSSS sodium solute transporter superfamily9e-70265
NC_020181:3585898:3590081359008135917301650Enterobacter aerogenes EA1509E, complete genomeAcetate permease ActP (cation/acetate symporter)9e-70265
NC_016612:1790256:1801501180150118031501650Klebsiella oxytoca KCTC 1686 chromosome, complete genomeacetate permease3e-69263
NC_009138:668000:6692846692846708101527Herminiimonas arsenicoxydans, complete genomeputative sodium:solute symporter; putative pantothenate transporter5e-69262
NC_008314:1465643:1482677148267714842481572Ralstonia eutropha H16 chromosome 2, complete sequenceAPC transporter, SSS family2e-66253
NC_007510:1959883:1985076198507619867101635Burkholderia sp. 383 chromosome 1, complete sequenceNa+/solute symporter2e-64247
NC_007510:3340008:3372079337207933737731695Burkholderia sp. 383 chromosome 1, complete sequenceacetate permease2e-64247
NC_008463:3168837:3196396319639631980541659Pseudomonas aeruginosa UCBPP-PA14, complete genomePredicted symporter7e-63241
NC_014539:743523:7850167850167866021587Burkholderia sp. CCGE1003 chromosome 1, complete sequenceSSS sodium solute transporter superfamily protein4e-60233
NC_013929:6008072:6024205602420560258631659Streptomyces scabiei 87.22 chromosome, complete genomesodium:solute symporter3e-57223
NC_013446:2623528:2628373262837326299411569Comamonas testosteroni CNB-2, complete genomeSSS sodium solute transporter1e-53211
NC_015565:530000:5444885444885461161629Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeSSS sodium solute transporter superfamily2e-21104
NC_013202:1144192:1163556116355611652441689Halomicrobium mukohataei DSM 12286, complete genomeNa+/solute symporter3e-1790.5
NC_014532:2989185:2991779299177929935721794Halomonas elongata DSM 2581, complete genomeNa+/solute symporter4e-1790.1
NC_013791:1323903:1341385134138513430461662Bacillus pseudofirmus OF4 chromosome, complete genomeSSF family Na(+)/solute symporter7e-1789.4
NC_015387:1803938:1812162181216218138561695Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative sodium symporter protein1e-1688.6
NC_015666:1849618:1854791185479118564821692Halopiger xanaduensis SH-6 chromosome, complete genomeputative sodium symporter protein5e-1686.3
NC_011753:3088952:3088952308895230906551704Vibrio splendidus LGP32 chromosome 1, complete genomesodium/solute symporter3e-1584
NC_011312:3060371:3062162306216230638651704Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completesodium/solute symporter4e-1583.6
NC_009767:433432:4334324334324357112280Roseiflexus castenholzii DSM 13941, complete genomeNa+/solute symporter6e-1582.8
NC_016589:1064575:1064575106457510665992025Burkholderia sp. YI23 chromosome 1, complete sequenceNa+/solute symporter2e-1480.9
NC_014008:2176633:2194433219443321962651833Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeputative sodium symporter protein5e-1479.7
NC_016885:1217517:1227394122739412291421749Pyrobaculum oguniense TE7 chromosome, complete genomeputative sodium:solute symporter, VC_2705 subfamily9e-1479
NC_013851:3321853:3345396334539633471951800Allochromatium vinosum DSM 180 chromosome, complete genomeputative sodium symporter protein2e-1274.3
NC_009075:587441:5898955898955919102016Burkholderia pseudomallei 668 chromosome II, complete sequencetransporter, solute:sodium symporter (SSS) family2e-1274.3
NC_007650:2429307:2462155246215524641702016Burkholderia thailandensis E264 chromosome II, complete sequencesodium:solute symporter family protein2e-1274.3
NC_009078:510525:5165845165845185992016Burkholderia pseudomallei 1106a chromosome II, complete sequencetransporter, solute:sodium symporter (SSS) family2e-1274.3
NC_016616:2112211:2114845211484521168872043Dechlorosoma suillum PS chromosome, complete genomeputative sodium:solute symporter, VC_2705 subfamily3e-1273.9
NC_007435:2352954:2355000235500023574232424Burkholderia pseudomallei 1710b chromosome II, complete sequencesodium:solute symporter family protein3e-1273.6
NC_008390:2448379:2460679246067924626942016Burkholderia cepacia AMMD chromosome 1, complete sequenceNa+/solute symporter1e-1172
NC_011000:2514897:2533174253317425351892016Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transport related membrane protein1e-1172
NC_009256:2509806:2529054252905425310692016Burkholderia vietnamiensis G4 chromosome 1, complete sequenceNa+/solute symporter9e-1272
NC_007298:1759881:1760556176055617625922037Dechloromonas aromatica RCB, complete genomeNa+/solute symporter6e-1169.7
NC_015320:273979:2871712871712888261656Archaeoglobus veneficus SNP6 chromosome, complete genomeputative sodium symporter protein1e-1068.6
NC_014311:1507945:1509949150994915120152067Ralstonia solanacearum PSI07 chromosome, complete genomeNa+/solute symporter3e-1067
NC_003295:2111730:2127208212720821292742067Ralstonia solanacearum GMI1000, complete genomePROBABLE SOLUTE:NA+ SYMPORTER PERMEASE TRANSMEMBRANE PROTEIN4e-1066.6
NC_007333:3360000:3364944336494433666321689Thermobifida fusca YX, complete genomeputative transmembrane transport protein2e-0964.3