Pre_GI: BLASTP Hits

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Query: NC_007333:1:11738 Thermobifida fusca YX, complete genome

Start: 11738, End: 12430, Length: 693

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007333:3626510:117381173812430693Thermobifida fusca YX, complete genomehypothetical protein4e-95347
NC_013510:1:119611196112698738Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-34146
NC_013595:10329633:125331253313180648Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-32138
NC_017186:3694:112781127811943666Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein3e-22105
NC_014318:3691:112781127811943666Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein3e-22105
NC_015312:1:1086110861119641104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein1e-2099.8
NC_021177:3997727:401865840186584019254597Streptomyces fulvissimus DSM 40593, complete genomePutative integral membrane protein7e-1994.4
NC_003888:4251867:425997942599794260536558Streptomyces coelicolor A3(2), complete genomeintegral membrane protein9e-1994
NC_008578:2431074:9582958210040459Acidothermus cellulolyticus 11B, complete genomehypothetical protein4e-1891.7
NC_012803:3691:107431074311243501Micrococcus luteus NCTC 2665, complete genomehypothetical protein7e-1890.9
NC_011886:4376261:114621146211848387Arthrobacter chlorophenolicus A6, complete genomeputative integral membrane protein2e-1685.9
NC_015145:4232283:117271172712173447Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein3e-1685.5
NC_014830:13179:158871588716534648Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein2e-1582.8
NC_015564:4727630:102921029210675384Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein2e-1582.4
NC_002677:1:111951119512106912Mycobacterium leprae TN, complete genomehypothetical protein5e-1581.3
NC_011896:3252925:111951119512106912Mycobacterium leprae Br4923, complete genomehypothetical protein5e-1581.3
NC_011896:1:111951119512106912Mycobacterium leprae Br4923, complete genomehypothetical protein5e-1581.3
NC_013521:4240468:113991139912226828Sanguibacter keddieii DSM 10542, complete genomehypothetical protein1e-1376.6
NC_014218:4424:9864986410298435Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomehypothetical protein5e-1271.2
NC_014550:3839389:101841018410807624Arthrobacter arilaitensis Re117, complete genomehypothetical protein3e-0962
NC_014550:7560:101841018410807624Arthrobacter arilaitensis Re117, complete genomehypothetical protein3e-0962
NC_015673:1:113831138312039657Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein1e-0757
NC_006087:1:105151051510928414Leifsonia xyli subsp. xyli str. CTCB07, complete genomeintegral membrane protein2e-0652.8