Pre_GI: BLASTP Hits

Some Help

Query: NC_007333:1743890:1863968 Thermobifida fusca YX, complete genome

Start: 1863968, End: 1866745, Length: 2778

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014721:11437:1934119341245905250Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetype 3a cellulose-binding domain protein0775
NC_015949:6336:1756417564235425979Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeglycoside hydrolase family protein0773
NC_014392:1769803:1778145177814517838385694Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCellulose 1,4-beta-cellobiosidase0762
NC_017295:1036348:1060689106068910632082520Clostridium acetobutylicum EA 2018 chromosome, complete genomeputative secreted sialidase0756
NC_015687:1037706:1061062106106210635812520Clostridium acetobutylicum DSM 1731 chromosome, complete genomesialidase0756
NC_003030:1037885:1061241106124110637602520Clostridium acetobutylicum ATCC 824, complete genomeProbably secreted sialidase; several ASP-boxes and dockerin domain0756
NC_012034:1925983:1947681194768119533955715Anaerocellum thermophilum DSM 6725, complete genomeglycoside hydrolase family 480753
NC_014720:980000:1026007102600710315175511Caldicellulosiruptor kronotskyensis 2002 chromosome, completecellulose 1,4-beta-cellobiosidase0753
NC_020291:2040047:2044451204445120469942544Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeBNR/Asp-box repeat-containing protein0732
NC_016935:4117485:4145998414599841506384641Paenibacillus mucilaginosus 3016 chromosome, complete genomexyloglucanase0726
NC_015690:4361000:4379929437992943844584530Paenibacillus mucilaginosus KNP414 chromosome, complete genomexyloglucanase0724
NC_016935:4117485:4170172417017241733723201Paenibacillus mucilaginosus 3016 chromosome, complete genomecellulose-binding family II protein0700
NC_015690:4361000:4404083440408344072923210Paenibacillus mucilaginosus KNP414 chromosome, complete genomecellulose-binding family II protein0693
NC_015275:3976631:3990129399012939941454017Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF2915e-174612
NC_015949:2418232:2439410243941024433093900Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein3e-133476
NC_016609:2150863:2155728215572821584542727Niastella koreensis GR20-10 chromosome, complete genomeglycosyl hydrolase family protein2e-84314
NC_016582:8711199:8719299871929987207201422Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-1,4-xylanase3e-25117
NC_014165:374674:4005694005694017501182Thermobispora bispora DSM 43833 chromosome, complete genomefamily 12 glycoside hydrolase1e-22109
NC_017093:5410932:5414074541407454151411068Actinoplanes missouriensis 431, complete genomeputative GDSL-like lipase/acylhydrolase with Cellulose binding domain6e-22106
NC_014393:3979350:3982200398220039837471548Clostridium cellulovorans 743B chromosome, complete genomeglycoside hydrolase family 52e-1999
NC_015514:33972:5202352023547612739Cellulomonas fimi ATCC 484 chromosome, complete genomeglycoside hydrolase family 97e-1996.7
NC_018750:7540450:7540450754045075417571308Streptomyces venezuelae ATCC 10712, complete genomeEndo-1,4-beta-xylanase A precursor3e-1688.2
NC_021177:5697210:5717921571792157197951875Streptomyces fulvissimus DSM 40593, complete genomeChitinase III1e-1379.3
NC_018750:5399316:5412029541202954137891761Streptomyces venezuelae ATCC 10712, complete genomeChitinase1e-1379.3
NC_016627:4871875:4871875487187548748803006Clostridium clariflavum DSM 19732 chromosome, complete genomecellobiohydrolase A (1,4-beta-cellobiosidase A)2e-1378.6
NC_016582:8243727:8261665826166582645442880Streptomyces bingchenggensis BCW-1 chromosome, complete genomecellulose 1,4-beta-cellobiosidase3e-1378.2
NC_013093:4890557:4910160491016049116411482Actinosynnema mirum DSM 43827, complete genomeserine/threonine protein kinase4e-1377.8
NC_003155:2730469:2749073274907327502481176Streptomyces avermitilis MA-4680, complete genomecellulose binding protein5e-1377.4
NC_013929:2375613:2392612239261223936851074Streptomyces scabiei 87.22 chromosome, complete genomecellulose/chitin binding protein1e-1275.9
NC_016627:4871875:4868075486807548718783804Clostridium clariflavum DSM 19732 chromosome, complete genomecellobiohydrolase A (1,4-beta-cellobiosidase A)7e-1273.6
NC_016109:6640000:6653798665379866548981101Kitasatospora setae KM-6054, complete genomeputative cellulose-binding protein6e-1273.6
NC_016114:1435436:1457402145740214584811080Streptomyces flavogriseus ATCC 33331 chromosome, complete genomechitin-binding protein1e-1172.8
NC_009380:3384737:3393833339383333952391407Salinispora tropica CNB-440 chromosome, complete genomecellulose-binding family II protein1e-1172.4
NC_007912:2930063:2935602293560229379202319Saccharophagus degradans 2-40, complete genomehypothetical protein5e-1170.9
NC_013131:7530000:7547701754770175491641464Catenulispora acidiphila DSM 44928, complete genomeglycoside hydrolase family 63e-1068.2
NC_015514:1923428:1938086193808619395821497Cellulomonas fimi ATCC 484 chromosome, complete genomecellulose-binding family II protein1e-0966.2
NC_018868:3229381:3248247324824732513333087Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomecellulase1e-0965.9
NC_012997:2941627:2957144295714429599092766Teredinibacter turnerae T7901, complete genomecellulose-binding/carbohydrate-binding domain protein4e-0964.3
NC_007912:2930063:2932444293244429339791536Saccharophagus degradans 2-40, complete genomehypothetical protein1e-0863.2
NC_018868:3229381:3251415325141532529471533Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein2e-0862.4
NC_008536:7834632:7840062784006278437273666Solibacter usitatus Ellin6076, complete genomehypothetical protein2e-0862
NC_010572:188500:2032932032932043751083Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative secreted cellulose-binding protein4e-0860.8
NC_018868:3229381:3246493324649332481691677Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeglycoside hydrolase7e-0860.5
NC_014151:370882:3708823708823722461365Cellulomonas flavigena DSM 20109 chromosome, complete genomecellulose-binding family II5e-0860.5
NC_008435:1215437:1260952126095212639543003Rhodopseudomonas palustris BisA53, complete genomehypothetical protein4e-0757.8
NC_009380:3734773:3734773373477337363951623Salinispora tropica CNB-440 chromosome, complete genomeglycoside hydrolase family protein8e-0756.6
NC_015638:2200477:2200477220047722036773201Lacinutrix sp. 5H-3-7-4 chromosome, complete genomehypothetical protein7e-0653.5
NC_014393:3425694:345387634538763454028153Clostridium cellulovorans 743B chromosome, complete genome9e-0653.1