Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1850605 Thermobifida fusca YX, complete genome

Start: 1850605, End: 1851762, Length: 1158

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010407:151599:1653021653021664951194Clavibacter michiganensis subsp. sepedonicus chromosome, completexylose isomerase6e-141500
NC_014246:1787154:1792799179279917939651167Mobiluncus curtisii ATCC 43063 chromosome, complete genomexylose isomerase1e-119429
NC_014212:670996:6832496832496844121164Meiothermus silvanus DSM 9946 chromosome, complete genomexylose isomerase3e-117422
NC_008010:321561:3369283369283381391212Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceXylose isomerase3e-117421
NC_019842:1847081:1860980186098018623171338Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,xylose isomerase6e-24112
NC_009725:1787262:1801447180144718027841338Bacillus amyloliquefaciens FZB42, complete genomeXylA6e-24112
NC_017188:1567000:1592862159286215941991338Bacillus amyloliquefaciens TA208 chromosome, complete genomexylose isomerase6e-24112
NC_017190:1832402:1848585184858518499221338Bacillus amyloliquefaciens LL3 chromosome, complete genomeXylose isomerase6e-24112
NC_017191:1568369:1594166159416615955031338Bacillus amyloliquefaciens XH7 chromosome, complete genomexylose isomerase6e-24112
NC_020410:1781884:1798834179883418001711338Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completexylose isomerase6e-24112
NC_017195:1852935:1873091187309118744281338Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completexylose isomerase3e-24112
NC_019896:2158223:2176407217640721777441338Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completexylose isomerase1e-23111
NC_000964:1873398:1891116189111618924531338Bacillus subtilis subsp. subtilis str. 168, complete genomexylose isomerase2e-23110
NC_020244:1875834:1897797189779718991341338Bacillus subtilis XF-1, complete genomexylose isomerase1e-23110
NC_014976:17909:1790917909192461338Bacillus subtilis BSn5 chromosome, complete genomexylose isomerase1e-23110
NC_020272:2077795:2099488209948821008251338Bacillus amyloliquefaciens IT-45, complete genomexylose isomerase6e-23108
NC_020210:1908000:1909932190993219112691338Geobacillus sp. GHH01, complete genomexylose isomerase1e-22107
NC_006510:1901954:1901954190195419032911338Geobacillus kaustophilus HTA426, complete genomexylose isomerase1e-22107
NC_014206:1745203:1766446176644617677831338Geobacillus sp. C56-T3 chromosome, complete genomexylose isomerase2e-22107
NC_011978:699500:7169587169587182921335Thermotoga neapolitana DSM 4359, complete genomeXylose isomerase2e-22106
NC_014650:2143033:2158878215887821602031326Geobacillus sp. Y4.1MC1 chromosome, complete genomexylose isomerase5e-22105
NC_014479:1831404:1845754184575418470911338Bacillus subtilis subsp. spizizenii str. W23 chromosome, completexylose isomerase5e-22105
NC_016047:1978312:1992284199228419936211338Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completexylose isomerase8e-22105
NC_011898:3973627:3990923399092339922421320Clostridium cellulolyticum H10, complete genomexylose isomerase6e-21102
NC_014538:187747:1904841904841918001317Thermoanaerobacter sp. X513 chromosome, complete genomexylose isomerase4e-21102
NC_010320:143109:1506181506181519341317Thermoanaerobacter sp. X514 chromosome, complete genomexylose isomerase4e-21102
NC_014169:1909482:1926538192653819278871350Bifidobacterium longum subsp. longum JDM301 chromosome, completeD-xylose isomerase7e-21101
NC_018644:637497:6408766408766421831308Alpha proteobacterium HIMB59 chromosome, complete genomeD-xylose isomerase2e-20100
NC_010003:225420:2324592324592337751317Petrotoga mobilis SJ95, complete genomexylose isomerase2e-20100
NC_007644:2099878:2114823211482321159651143Moorella thermoacetica ATCC 39073, complete genomeXylose isomerase-like TIM barrel1e-1894.4
NC_014041:3229867:3245682324568232469921311Zunongwangia profunda SM-A87 chromosome, complete genomexylose isomerase3e-1893.2
NC_015224:4426167:4444682444468244460011320Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,xylose isomerase5e-1892.4
NC_006905:3780000:3800105380010538014271323Salmonella enterica subsp. enterica serovar Choleraesuis strxylose isomerase5e-1892.4
NC_007952:444616:4624634624634637851323Burkholderia xenovorans LB400 chromosome 2, complete sequenceXylose isomerase1e-1790.9
NC_008800:4488112:4509849450984945111681320Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,xylose isomerase2e-1790.5
NC_010465:62348:6234862348636671320Yersinia pseudotuberculosis YPIII, complete genomexylose isomerase3e-1789.7
NC_008150:4634695:4649076464907646503951320Yersinia pestis Antiqua, complete genomexylose isomerase3e-1789.7
NC_017160:4508000:4527070452707045283891320Yersinia pestis D182038 chromosome, complete genomexylose isomerase3e-1789.7
NC_015732:3105649:3105649310564931069921344Spirochaeta caldaria DSM 7334 chromosome, complete genomeXylose isomerase6e-1789
NC_014837:33014:5554855548568701323Pantoea sp. At-9b chromosome, complete genomexylose isomerase3e-1686.7
NC_012731:600518:6575606575606588791320Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomexylose isomerase6e-1685.5
NC_013850:4829455:4831108483110848324271320Klebsiella variicola At-22 chromosome, complete genomexylose isomerase2e-1584
NC_011283:4966471:4968123496812349694421320Klebsiella pneumoniae 342 chromosome, complete genomexylose isomerase2e-1583.6
NC_010162:7620000:7625761762576176270921332Sorangium cellulosum 'So ce 56', complete genomexylose isomerase4e-1479.3
NC_021066:601029:606616606616607596981Raoultella ornithinolytica B6, complete genomeXylA1e-1377.8
NC_009921:465683:483525483525484421897Frankia sp. EAN1pec, complete genomeXylose isomerase domain protein TIM barrel3e-1273.2
NC_015588:1847500:186627718662771867266990Isoptericola variabilis 225 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel4e-0859.7
NC_014839:253961:282205282205283197993Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceXylose isomerase domain-containing protein TIM barrel1e-0758.2