Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1792244 Thermobifida fusca YX, complete genome

Start: 1792244, End: 1792660, Length: 417

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:7561923:760623876062387606651414Streptomyces coelicolor A3(2), complete genomearsenate reductase7e-48188
NC_013174:373726:387942387942388358417Jonesia denitrificans DSM 20603, complete genomeProtein-tyrosine phosphatase, low molecular weight4e-46182
NC_014151:4021394:404062440406244041076453Cellulomonas flavigena DSM 20109 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight1e-45181
NC_014666:8016066:803435880343588034765408Frankia sp. EuI1c chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight2e-45180
NC_013929:2696648:270164727016472702066420Streptomyces scabiei 87.22 chromosome, complete genomeprotein phosphatase3e-43173
NC_006361:4597718:462852246285224628935414Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-37154
NC_014151:4021394:4039581403958140406241044Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family7e-32135
NC_013929:2696648:270097027009702701599630Streptomyces scabiei 87.22 chromosome, complete genomeprotein phosphatase2e-31134
NC_010162:7899980:790653079065307906952423Sorangium cellulosum 'So ce 56', complete genomearsenate reductase (glutaredoxin)5e-28122
NC_012704:1870000:190615819061581906904747Corynebacterium kroppenstedtii DSM 44385, complete genomearsenate reductase4e-27119
NC_013174:373726:3884163884163894291014Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, ArsR family8e-26115
NC_012883:1522920:153024515302451530694450Thermococcus sibiricus MM 739, complete genomeTrx-linked arsenate reductase3e-25113
NC_014729:1908086:191210819121081912527420Halogeometricum borinquense DSM 11551 chromosome, complete genomeprotein-tyrosine-phosphatase5e-24109
NC_014218:1689002:169019116901911690586396Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight1e-22105
NC_009975:688667:702886702886703290405Methanococcus maripaludis C6, complete genomeprotein tyrosine phosphatase4e-22103
NC_008261:967973:988237988237988635399Clostridium perfringens ATCC 13124, complete genomearsenate reductase ArsC2e-2097.8
NC_003366:1013773:102677110267711027169399Clostridium perfringens str. 13, complete genomeprobable arsenate reductase3e-2097.1
NC_014334:2696000:271340127134012713814414Lactobacillus casei str. Zhang chromosome, complete genomeprotein-tyrosine-phosphatase3e-1993.6
NC_013205:576583:597908597908598402495Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,arsenate reductase (thioredoxin)4e-1890.1
NC_014151:4021394:403669340366934037115423Cellulomonas flavigena DSM 20109 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight4e-1889.7
NC_008529:887008:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008529:887008:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008529:906576:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008529:906576:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008529:918277:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008529:918277:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase1e-1788.6
NC_008054:930890:931901931901932299399Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative phosphotyrosine protein phosphatase1e-1788.6
NC_010730:952574:969811969811970236426Sulfurihydrogenibium sp. YO3AOP1, complete genomeprotein tyrosine phosphatase3e-1787
NC_013440:3870697:388703438870343887897864Haliangium ochraceum DSM 14365, complete genomeProtein-tyrosine phosphatase, low molecular weight1e-1685.5
NC_012803:2195808:222897322289732229401429Micrococcus luteus NCTC 2665, complete genomeprotein-tyrosine-phosphatase1e-1685.1
NC_013161:3448966:345016634501663450558393Cyanothece sp. PCC 8802, complete genomearsenate reductase, glutathione/glutaredoxin type2e-1581.3
NC_014624:224213:240216240216240605390Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1580.9
NC_011726:2793669:281089928108992811291393Cyanothece sp. PCC 8801, complete genomearsenate reductase, glutathione/glutaredoxin type2e-1580.9
NC_015690:3477573:352058535205853521007423Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsC8e-1579
NC_015420:35384:783878388254417Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completeprotein tyrosine phosphatase9e-1579
NC_004369:1552847:156752915675291568002474Corynebacterium efficiens YS-314, complete genomeputative reductase1e-1478.2
NC_007907:5297477:530452053045205304924405Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1477
NC_016023:2163000:218167921816792182080402Bacillus coagulans 36D1 chromosome, complete genomeprotein tyrosine phosphatase5e-1476.3
NC_011071:2207385:222616322261632226696534Stenotrophomonas maltophilia R551-3, complete genomeprotein tyrosine phosphatase6e-1476.3
NC_003912:1629937:163120816312081631630423Campylobacter jejuni RM1221, complete genomearsenate reductase1e-1375.1
NC_015152:1230995:124760112476011248011411Spirochaeta sp. Buddy chromosome, complete genomeprotein tyrosine phosphatase2e-1374.3
NC_009674:1707944:170902617090261709430405Bacillus cytotoxicus NVH 391-98 chromosome, complete genomearsenate reductase2e-1374.3
NC_006582:883922:905996905996906415420Bacillus clausii KSM-K16, complete genomearsenate reductase5e-1373.2
NC_007907:5185510:522050152205015220914414Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1271.6
NC_011830:1288984:130855513085551308989435Desulfitobacterium hafniense DCB-2, complete genomearsenate reductase (thioredoxin)2e-1271.6
NC_019897:3669888:369366136936613694083423Thermobacillus composti KWC4 chromosome, complete genomethioredoxin-dependent arsenate reductase2e-1271.2
NC_020244:4020315:402943940294394029867429Bacillus subtilis XF-1, complete genomethioredoxin-coupled arsenate reductase2e-1270.9
NC_012032:1827244:183342318334231834184762Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, ArsR family3e-1270.5
NC_010175:1825878:183205718320571832818762Chloroflexus aurantiacus J-10-fl, complete genomelow molecular weight phosphotyrosine protein phosphatase3e-1270.5
NC_018866:108812:137906137906138319414Dehalobacter sp. DCA chromosome, complete genomeArsenate reductase ArsC5e-1269.7
NC_018867:179975:205501205501205914414Dehalobacter sp. CF chromosome, complete genomeArsenate reductase ArsC5e-1269.7
NC_014976:627935:633415633415633834420Bacillus subtilis BSn5 chromosome, complete genomearsenate reductase5e-1269.7
NC_006510:591339:614664614664615086423Geobacillus kaustophilus HTA426, complete genomearsenate reductase8e-1269.3
NC_016593:596500:621621621621622043423Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein8e-1269.3
NC_011658:2978000:299553829955382995942405Bacillus cereus AH187 chromosome, complete genomearsenate reductase7e-1269.3
NC_016771:2933886:295141529514152951819405Bacillus cereus NC7401, complete genomearsenate reductase7e-1269.3
NC_010682:1913941:191394119139411914435495Ralstonia pickettii 12J chromosome 1, complete sequenceprotein tyrosine phosphatase6e-1269.3
NC_010545:11950:375213752137940420Corynebacterium urealyticum DSM 7109, complete genomeputative arsenate reductase8e-1268.9
NC_018704:1424728:1429086142908614309091824Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein9e-1268.9
NC_015320:211147:227558227558227944387Archaeoglobus veneficus SNP6 chromosome, complete genomeprotein tyrosine phosphatase2e-1168.2
NC_014650:1862165:186324718632471863669423Geobacillus sp. Y4.1MC1 chromosome, complete genomearsenate reductase (thioredoxin)2e-1167.8
NC_015660:1869962:188212618821261882548423Geobacillus thermoglucosidasius C56-YS93 chromosome, completeprotein tyrosine phosphatase2e-1167.8
NC_013656:1549634:154963415496341550038405Lactococcus lactis subsp. lactis KF147, complete genomephage protein-tyrosine-phosphatase2e-1167.8
NC_014206:3391352:341419634141963414615420Geobacillus sp. C56-T3 chromosome, complete genomearsenate reductase (thioredoxin)4e-1167
NC_010794:1476494:148033114803311480765435Methylacidiphilum infernorum V4, complete genomeArsenate reductase3e-1167
NC_016047:683368:692482692482692901420Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completearsenate reductase5e-1166.6
NC_014507:863210:894333894333894740408Methanoplanus petrolearius DSM 11571 chromosome, complete genomeprotein-tyrosine phosphatase, low molecular weight7e-1165.9
NC_013939:1460142:146644414664441466860417Deferribacter desulfuricans SSM1, complete genomearsenate reductase (glutaredoxin)1e-1065.1
NC_002937:1706000:172533217253321725775444Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completearsenate reductase3e-1063.9
NC_011894:5787990:580219358021935802720528Methylobacterium nodulans ORS 2060, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-1063.5
NC_011894:5787990:583184258318425832369528Methylobacterium nodulans ORS 2060, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-1063.5
NC_008751:1736512:174248217424821742925444Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein tyrosine phosphatase4e-1063.2
NC_007519:2773000:278705527870552787489435Desulfovibrio alaskensis G20 chromosome, complete genomeprotein tyrosine phosphatase4e-1063.2
NC_015501:1762450:177617317761731776556384Porphyromonas asaccharolytica DSM 20707 chromosome, completeprotein tyrosine phosphatase4e-1063.2
NC_002947:2157648:217477121747712175259489Pseudomonas putida KT2440, complete genomearsenate reductase6e-1062.8
NC_008344:669498:677594677594678100507Nitrosomonas eutropha C91, complete genomeprotein tyrosine phosphatase6e-1062.8
NC_004741:2593012:260413326041332604639507Shigella flexneri 2a str. 2457T, complete genomehypothetical arsenate reductase6e-1062.8
NC_008344:2374761:238716023871602387666507Nitrosomonas eutropha C91, complete genomeprotein tyrosine phosphatase6e-1062.8
NC_015186:2908387:292664329266432927167525Acidiphilium multivorum AIU301, complete genomearsenate reductase7e-1062.8
NC_009138:3153576:316717631671763167682507Herminiimonas arsenicoxydans, complete genomearsenate reductase9e-1062.4
NC_018012:1789028:180502218050221805456435Thiocystis violascens DSM 198 chromosome, complete genomeprotein-tyrosine-phosphatase8e-1062.4
NC_010681:221416:223174223174223695522Burkholderia phytofirmans PsJN chromosome 1, complete sequenceprotein tyrosine phosphatase7e-1062.4
NC_009138:467268:503274503274503789516Herminiimonas arsenicoxydans, complete genomearsenate reductase1e-0961.6
NC_010102:4557037:455703745570374557531495Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0961.6
NC_007907:4714844:473024847302484730661414Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0961.2
NC_014666:5057000:506952650695265069714189Frankia sp. EuI1c chromosome, complete genome3e-0960.8
NC_010087:376918:415990415990416484495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase3e-0960.5
NC_010801:505000:508374508374508868495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein-tyrosine phosphatase3e-0960.5
NC_010170:4800000:481040648104064810903498Bordetella petrii, complete genomehypothetical protein3e-0960.5
NC_007509:3668:485964859649102507Burkholderia sp. 383 chromosome 3, complete sequenceprotein tyrosine phosphatase3e-0960.5
NC_007298:750361:767392767392767886495Dechloromonas aromatica RCB, complete genomeLow molecular weight phosphotyrosine protein phosphatase3e-0960.5
NC_010515:1124298:115005811500581150552495Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein tyrosine phosphatase6e-0959.7
NC_010087:376918:379726379726380220495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase8e-0959.3
NC_014640:5047201:505290950529095053409501Achromobacter xylosoxidans A8 chromosome, complete genomeprotein tyrosine phosphatase7e-0959.3
NC_009138:1974935:198147119814711981965495Herminiimonas arsenicoxydans, complete genomeArsenate reductase6e-0959.3
NC_018080:6048516:607444260744426074912471Pseudomonas aeruginosa DK2 chromosome, complete genomeprotein tyrosine phosphatase6e-0959.3
NC_010682:3745000:374687037468703747364495Ralstonia pickettii 12J chromosome 1, complete sequenceprotein tyrosine phosphatase1e-0858.9
NC_017986:331610:346330346330346806477Pseudomonas putida ND6 chromosome, complete genomeprotein tyrosine phosphatase1e-0858.5
NC_015733:5909821:591939659193965919920525Pseudomonas putida S16 chromosome, complete genomeprotein tyrosine phosphatase1e-0858.5
NC_010801:505000:507863507863508357495Burkholderia multivorans ATCC 17616 chromosome 3, completearsenate reductase1e-0858.5
NC_010087:376918:416501416501416995495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase1e-0858.5
NC_011149:2040396:204365620436562044132477Salmonella enterica subsp. enterica serovar Agona str. SL483,arsenate reductase3e-0857.4
NC_018080:6048516:607364460736446074057414Pseudomonas aeruginosa DK2 chromosome, complete genomeArsR family transcriptional regulator3e-0857.4
NC_010084:2484000:252904025290402529528489Burkholderia multivorans ATCC 17616 chromosome 1, completeprotein tyrosine phosphatase5e-0856.6
NC_014394:2577949:258311925831192583616498Gallionella capsiferriformans ES-2 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight6e-0856.2
NC_010087:376918:379221379221379715495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase6e-0856.2
NC_015136:912276:934343934343934837495Burkholderia sp. CCGE1001 chromosome 1, complete sequenceprotein tyrosine phosphatase6e-0856.2
NC_016589:2875000:287945328794532879968516Burkholderia sp. YI23 chromosome 1, complete sequenceprotein tyrosine phosphatase6e-0856.2
NC_007519:2773000:278661827866182787058441Desulfovibrio alaskensis G20 chromosome, complete genomeprotein tyrosine phosphatase9e-0855.5
NC_003296:1419992:142416614241661424660495Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE ARSENATE REDUCTASE (ARSENICAL PUMP MODIFIER) PROTEIN1e-0755.1
NC_010943:2422838:245363324536332454124492Stenotrophomonas maltophilia K279a, complete genomeputative arsenate reductase3e-0753.9
NC_010410:3606826:368551036855103685983474Acinetobacter baumannii AYE, complete genomeProtein arsC (Arsenate reductase) (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase)4e-0753.5
NC_011071:2207385:222253222225322223023492Stenotrophomonas maltophilia R551-3, complete genomeprotein tyrosine phosphatase4e-0753.5
NC_011992:2279752:228745422874542287933480Acidovorax ebreus TPSY, complete genomeProtein-tyrosine phosphatase, low molecular weight4e-0753.5
NC_010524:3445641:344973734497373450243507Leptothrix cholodnii SP-6, complete genomeprotein tyrosine phosphatase5e-0753.1
NC_015520:55710:557105571056177468Mahella australiensis 50-1 BON chromosome, complete genomeprotein tyrosine phosphatase7e-0752.8
NC_009720:4367584:438109743810974381984888Xanthobacter autotrophicus Py2, complete genomeprotein tyrosine phosphatase8e-0752.4
NC_007908:4069150:408702840870284087510483Rhodoferax ferrireducens T118, complete genomeprotein tyrosine phosphatase1e-0652
NC_011969:4993386:502683150268315027271441Bacillus cereus Q1 chromosome, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-0651.2
NC_019903:3537545:354790935479093548355447Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,protein-tyrosine-phosphatase2e-0651.2
NC_017200:5149528:516675751667575167197441Bacillus thuringiensis serovar finitimus YBT-020 chromosome,low molecular weight phosphotyrosine protein phosphatase family protein2e-0651.2
NC_007530:5033095:504901850490185049458441Bacillus anthracis str. 'Ames Ancestor', complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-0651.2
NC_003997:5032969:504889250488925049332441Bacillus anthracis str. Ames, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-0651.2
NC_012659:5031827:504891850489185049358441Bacillus anthracis str. A0248, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-0651.2
NC_003909:4996783:502759150275915028031441Bacillus cereus ATCC 10987, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-0650.8
NC_005085:2609934:262378826237882624282495Chromobacterium violaceum ATCC 12472, complete genomearsenate reductase3e-0650.4