Pre_GI: BLASTP Hits

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Query: NC_007333:1677406:1698020 Thermobifida fusca YX, complete genome

Start: 1698020, End: 1699156, Length: 1137

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:483425:4945994945994956991101Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, 2-nitropropane dioxygenase family2e-1067
NC_017093:2129450:2131831213183121329251095Actinoplanes missouriensis 431, complete genomeputative dioxygenase6e-72271
NC_017167:1088713:1090581109058110916661086Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-12-nitropropane dioxygenase1e-1894
NC_017186:7333732:7352376735237673534251050Amycolatopsis mediterranei S699 chromosome, complete genome2-nitropropane dioxygenase1e-1377.4
NC_014318:7333688:7352332735233273533811050Amycolatopsis mediterranei U32 chromosome, complete genome2-nitropropane dioxygenase1e-1377.4
NC_013856:169974:1773781773781784391062Azospirillum sp. B510 plasmid pAB510b, complete sequenceenoyl-[acyl carrier protein] reductase II3e-0859.7
NC_019896:1483073:1488986148898614900291044Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete2-nitropropane dioxygenase YrpB5e-1375.9
NC_017195:2498113:2535016253501625361641149Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYrpB8e-1375.1
NC_010623:1871492:1901647190164719027621116Burkholderia phymatum STM815 chromosome 2, complete sequence2-nitropropane dioxygenase NPD3e-59229
NC_015391:1323171:133716313371631338122960Carnobacterium sp. 17-4 chromosome, complete genomeputative anionic nitroalkane dioxygenase1e-1584.3
NC_003030:3763054:377615137761513777083933Clostridium acetobutylicum ATCC 824, complete genomeDioxygenase related to 2-nitropropane dioxygenase6e-1582
NC_015687:3766000:377773437777343778666933Clostridium acetobutylicum DSM 1731 chromosome, complete genome2-nitropropane dioxygenase-like protein6e-1582
NC_017295:3762622:377550337755033776435933Clostridium acetobutylicum EA 2018 chromosome, complete genomeDioxygenase6e-1582
NC_018664:1699618:171267017126701713608939Clostridium acidurici 9a chromosome, complete genomeenoyl-[acyl-carrier protein] reductase FabI2e-1273.9
NC_009617:1278000:128190812819081282849942Clostridium beijerinckii NCIMB 8052 chromosome, complete genome2-nitropropane dioxygenase9e-1478.2
NC_009697:3809044:382160338216033822529927Clostridium botulinum A str. ATCC 19397 chromosome, complete2-nitropropane dioxygenase2e-1480.9
NC_009495:3832500:384506938450693845995927Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeoxidoreductase, 2-nitropropane dioxygenase2e-1480.9
NC_009698:3706154:371871337187133719639927Clostridium botulinum A str. Hall chromosome, complete genome2-nitropropane dioxygenase2e-1480.9
NC_012563:4101000:411358741135874114513927Clostridium botulinum A2 str. Kyoto, complete genomeoxidoreductase, 2-nitropropane dioxygenase family2e-1377
NC_010520:3938490:395106339510633951989927Clostridium botulinum A3 str. Loch Maree, complete genomeoxidoreductase, 2-nitropropane dioxygenase family1e-1480.9
NC_010674:1170264:117653711765371177478942Clostridium botulinum B str. Eklund 17B, complete genomeputative enoyl-(acyl-carrier-protein) reductase II1e-1378.2
NC_010516:3903867:391642839164283917354927Clostridium botulinum B1 str. Okra, complete genomeoxidoreductase, 2-nitropropane dioxygenase family6e-1789
NC_012658:3923546:393612239361223937048927Clostridium botulinum Ba4 str. 657 chromosome, complete genome2-nitropropane dioxygenase family oxidoreductase1e-1584.3
NC_015425:34861:430814308144031951Clostridium botulinum BKT015925 chromosome, complete genome2-nitropropane dioxygenase3e-1376.6
NC_010723:1133163:114043411404341141375942Clostridium botulinum E3 str. Alaska E43, complete genomeputative enoyl-(acyl-carrier-protein) reductase II2e-1480.5
NC_017297:3939328:395189039518903952816927Clostridium botulinum F str. 230613 chromosome, complete genomeoxidoreductase, 2-nitropropane dioxygenase family7e-1582
NC_009699:3940984:395354739535473954473927Clostridium botulinum F str. Langeland chromosome, complete genome2-nitropropane dioxygenase7e-1582
NC_014393:4988127:499975749997575000698942Clostridium cellulovorans 743B chromosome, complete genomeenoyl-(acyl-carrier-protein) reductase II3e-1583.2
NC_017179:1239991:124832012483201249249930Clostridium difficile BI1, complete genometrans-2-enoyl-ACP reductase2e-1273.9
NC_013315:1230214:123854312385431239472930Clostridium difficile CD196 chromosome, complete genometrans-2-enoyl-ACP reductase2e-1273.9
NC_013316:1225797:123615912361591237088930Clostridium difficile R20291, complete genometrans-2-enoyl-ACP reductase2e-1273.9
NC_015275:3299923:331126533112653312230966Clostridium lentocellum DSM 5427 chromosome, complete genomeenoyl-(acyl-carrier-protein) reductase II1e-1481.3
NC_014328:4546390:455816545581654559103939Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeenoyl-[acyl-carrier protein] reductase8e-1271.6
NC_008593:37456:438044380444754951Clostridium novyi NT, complete genomeenoyl-(acyl-carrier-protein) reductase II3e-1480.1
NC_021182:4882494:489384748938474894785939Clostridium pasteurianum BC1, complete genomeputative enoyl-(acyl-carrier-protein) reductase II6e-1479
NC_020291:1266885:129108312910831292024942Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeenoyl-[acyl-carrier protein] reductase FabI2e-1377
NC_004557:81362:876568765688618963Clostridium tetani E88, complete genomeenoyl-[acyl-carrier protein] reductase (NADH)6e-1685.5
NC_016782:1359000:1376494137649413793102817Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein3e-0653.1
NC_016786:1359064:1376464137646413792802817Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein3e-0653.1
NC_016787:1350676:1369571136957113724802910Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein2e-1067
NC_016783:1397975:1398574139857414014832910Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein3e-1066.6
NC_016790:1345638:1345638134563813485472910Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein2e-1067
NC_007164:62816:764697646977440972Corynebacterium jeikeium K411, complete genomeputative dioxygenase related to 2-nitropropane dioxygenases6e-1065.5
NC_013939:1841890:184629118462911847262972Deferribacter desulfuricans SSM1, complete genome2-nitropropane dioxygenase5e-1065.9
NC_019903:2708500:271612127161212717065945Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,2-nitropropane dioxygenase2e-0654.3
NC_019903:2708500:272005327200532721000948Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,enoyl-ACP reductase4e-1479.3
NC_011830:4031901:405860740586074059554948Desulfitobacterium hafniense DCB-2, complete genomeenoyl-(acyl-carrier-protein) reductase II4e-1582.8
NC_021184:3793285:381115938111593812127969Desulfotomaculum gibsoniae DSM 7213, complete genome2-nitropropane dioxygenase-like enzyme2e-0963.9
NC_015185:875324:888570888570889529960Desulfurobacterium thermolithotrophum DSM 11699 chromosome,enoyl-(acyl-carrier-protein) reductase II3e-1273.6
NC_007722:2993852:3015323301532330164381116Erythrobacter litoralis HTCC2594, complete genomeoxidoreductase, 2-nitropropane dioxygenase family protein3e-35149
NC_012778:1778654:178990017899001790829930Eubacterium eligens ATCC 27750, complete genomeenoyl-acyl carrier protein(ACP) reductase9e-1788.2
NC_009718:643200:680010680010680981972Fervidobacterium nodosum Rt17-B1, complete genome2-nitropropane dioxygenase NPD8e-1478.2
NC_014472:3785319:379108637910863792027942Flavobacteriales bacterium HTCC2170 chromosome, complete genomeputative dioxygenase2e-1377.4
NC_014206:1745203:1769485176948517705401056Geobacillus sp. C56-T3 chromosome, complete genome2-nitropropane dioxygenase NPD1e-0861.2
NC_013441:27877:5711557115582421128Gordonia bronchialis DSM 43247, complete genome2-nitropropane dioxygenase NPD2e-55216
NC_019978:1410041:142132714213271422271945Halobacteroides halobius DSM 5150, complete genomeputative enoyl-(acyl-carrier-protein) reductase II5e-1479
NC_019978:1410041:141815914181591419130972Halobacteroides halobius DSM 5150, complete genome2-nitropropane dioxygenase-like enzyme4e-0756.2
NC_014323:3976351:4009351400935140104271077Herbaspirillum seropedicae SmR1 chromosome, complete genome2-nitropropane dioxygenase2e-0964.3
NC_014633:339181:346428346428347369942Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceenoyl-(acyl-carrier-protein) reductase II1e-1584.3
NC_007802:1093785:1102176110217611031921017Jannaschia sp. CCS1, complete genome2-nitropropane dioxygenase, NPD2e-1067
NC_007802:4071006:4075837407583740768621026Jannaschia sp. CCS1, complete genome2-nitropropane dioxygenase, NPD4e-0962.8
NC_007930:180281:190471190471191367897Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Hypothetical dioxygenase/reductase5e-1892.4
NC_010524:3302398:3322464332246433235251062Leptothrix cholodnii SP-6, complete genome2-nitropropane dioxygenase NPD5e-0859.3
NC_008576:4467745:448863944886394489634996Magnetococcus sp. MC-1, complete genome2-nitropropane dioxygenase, NPD1e-0758.2
NC_011894:3029964:3053778305377830547941017Methylobacterium nodulans ORS 2060, complete genome2-nitropropane dioxygenase NPD8e-2098.2
NC_020133:5710661:5713016571301657140831068Mycobacterium liflandii 128FXT, complete genome2-nitropropane dioxygenase2e-1377.4
NC_010612:6113155:6117733611773361188001068Mycobacterium marinum M, complete genome2-nitropropane dioxygenase7e-1375.5
NC_015576:4070195:4077114407711440782501137Mycobacterium sp. JDM601 chromosome, complete genomedioxygenase8e-75281
NC_017904:2724941:275088627508862751851966Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein6e-0962
NC_018681:6977670:697767069776706978584915Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein8e-0755.1
NC_008699:2916752:2918393291839329194811089Nocardioides sp. JS614, complete genome2-nitropropane dioxygenase, NPD2e-0963.9
NC_014210:5048502:5053468505346850545021035Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2-nitropropane dioxygenase NPD4e-0652.8
NC_016599:144844:146420146420147367948Owenweeksia hongkongensis DSM 17368 chromosome, complete genome2-nitropropane dioxygenase7e-1272
NC_016641:373623:3935413935413946141074Paenibacillus terrae HPL-003 chromosome, complete genomenitropropane dioxygenase / trans-enoyl-CoA reductase family protein2e-1583.6
NC_016641:2291363:2291363229136322924301068Paenibacillus terrae HPL-003 chromosome, complete genomenitropropane dioxygenase / trans-enoyl-CoA reductase family protein3e-1273.6
NC_015501:1669521:168331216833121684268957Porphyromonas asaccharolytica DSM 20707 chromosome, complete2-nitropropane dioxygenase NPD5e-1065.9
NC_009439:608500:6104866104866116221137Pseudomonas mendocina ymp, complete genome2-nitropropane dioxygenase, NPD4e-1272.8
NC_007347:1596040:1604666160466616056731008Ralstonia eutropha JMP134 chromosome 1, complete sequence2-nitropropane dioxygenase, NPD2e-1583.6
NC_007974:2097334:213352121335212134492972Ralstonia metallidurans CH34 chromosome 2, complete sequence2-nitropropane dioxygenase, NPD4e-0652.8
NC_014006:1365207:138806613880661389010945Sphingobium japonicum UT26S chromosome 1, complete genome2-nitropropane dioxygenase family protein2e-0653.9
NC_009487:921884:9666489666489677151068Staphylococcus aureus subsp. aureus JH9 chromosome, complete2-nitropropane dioxygenase2e-20100
NC_013798:345339:367321367321368289969Streptococcus gallolyticus UCN34, complete genomeputative dioxygenases related to 2-nitropropane dioxygenase2e-0653.9
NC_013928:395028:417033417033417998966Streptococcus mutans NN2025, complete genometrans-2-enoyl-ACP reductase9e-1168.2
NC_004350:1252500:125580412558041256787984Streptococcus mutans UA159, complete genomeputative enoyl-(acyl-carrier-protein) reductase4e-1066.2
NC_016582:389729:395669395669396634966Streptomyces bingchenggensis BCW-1 chromosome, complete genomedioxygenase6e-0962
NC_013929:7606749:7608036760803676090971062Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase4e-1272.8
NC_018750:1835500:1856667185666718577191053Streptomyces venezuelae ATCC 10712, complete genome2-nitropropane dioxygenase9e-1374.7
NC_014964:1309845:132009813200981321048951Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeenoyl-(acyl-carrier-protein) reductase II2e-1996.7
NC_015958:1422319:143191714319171432858942Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeenoyl-(acyl-carrier-protein) reductase II9e-2098.2
NC_015499:1466794:147894214789421479907966Thermodesulfobium narugense DSM 14796 chromosome, complete genome2-nitropropane dioxygenase NPD7e-0962
NC_014931:2511423:2528048252804825291031056Variovorax paradoxus EPS chromosome, complete genome2-nitropropane dioxygenase NPD5e-0858.9
NC_006833:976010:9908739908739919131041Wolbachia endosymbiont strain TRS of Brugia malayi, completeProbable trans-2-enoyl-ACP reductase, FabK2e-0860.1