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Query: NC_007333:1677406:1695124 Thermobifida fusca YX, complete genome

Start: 1695124, End: 1695765, Length: 642

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015576:3976679:400509540050954005658564Mycobacterium sp. JDM601 chromosome, complete genomeTetR family transcriptional regulator3e-29128
NC_013510:4319296:432515443251544325825672Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family9e-2096.7
NC_014640:4193193:420211042021104202850741Achromobacter xylosoxidans A8 chromosome, complete genomeTetR family transcriptional regulator4e-1891.7
NC_015576:3976679:399689939968993997426528Mycobacterium sp. JDM601 chromosome, complete genomeregulatory protein2e-1582.8
NC_014218:1485568:149550814955081496122615Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, TetR family2e-1065.9
NC_014814:2588628:263759526375952638245651Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator8e-0960.5
NC_009338:3410349:342183734218373422478642Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator7e-0960.5
NC_019697:4108944:412618041261804126779600Chamaesiphon minutus PCC 6605, complete genometranscriptional regulator2e-0859.7
NC_008278:3601959:360548336054833606088606Frankia alni ACN14a, complete genomeputative PhlF, transcriptional repressor of 2, 4-DAPG biosynthesis, TetR family5e-0857.8
NC_018524:5066720:507384450738445074395552Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, tetR family protein9e-0857
NC_016582:10287865:103050321030503210305622591Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator2e-0756.2
NC_017904:2379387:241830524183052418841537Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein1e-0756.2
NC_021177:163000:181013181013181522510Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, TetR family1e-0756.2
NC_007777:3231649:325052232505223251217696Frankia sp. CcI3, complete genometranscriptional regulator, TetR family6e-0754.3
NC_013521:2254534:227353822735382274206669Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family7e-0753.9
NC_003296:1461538:146352614635261464227702Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN1e-0653.1
NC_013530:3082587:309810430981043098850747Xylanimonas cellulosilytica DSM 15894, complete genometranscriptional regulator, TetR family2e-0652.8
NC_009953:3426344:344533134453313445921591Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator6e-0651.2
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein7e-0650.8
NC_010725:4035397:406738140673814068019639Methylobacterium populi BJ001, complete genometranscriptional regulator, TetR family7e-0650.4
NC_010338:426388:448627448627449271645Caulobacter sp. K31, complete genometranscriptional regulator, TetR family8e-0650.4