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Query: NC_007333:1677406:1685972 Thermobifida fusca YX, complete genome

Start: 1685972, End: 1687066, Length: 1095

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:5409324:5427563542756354286781116Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,ATPase associated with various cellular activities AAA_55e-163573
NC_014165:2533040:2535162253516225362471086Thermobispora bispora DSM 43833 chromosome, complete genomeATPase9e-160563
NC_009617:3184924:3193432319343231945471116Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeATPase7e-73274
NC_014328:680085:7004567004567015711116Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ATPase1e-69263
NC_015577:1682970:1686598168659816877131116Treponema azotonutricium ZAS-9 chromosome, complete genomeATPase, AAA family6e-64244
NC_014205:1364796:138065713806571381574918Staphylothermus hellenicus DSM 12710 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-1377
NC_017954:301562:314055314055314990936Thermogladius cellulolyticus 1633 chromosome, complete genomeATPase4e-1375.9
NC_014160:801618:814026814026814946921Thermosphaera aggregans DSM 11486 chromosome, complete genomeATPase7e-1271.6
NC_014961:1114939:113014211301421131065924Desulfurococcus mucosus DSM 2162 chromosome, complete genomeATPase2e-1170.9
NC_015931:1537960:155119515511951552124930Pyrolobus fumarii 1A, complete genomeATPase7e-1168.6
NC_005213:202400:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp7e-1168.6
NC_005213:295994:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp7e-1168.6
NC_005213:295994:347905347905348897993Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein9e-1168.2
NC_005213:202400:347905347905348897993Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein9e-1168.2
NC_009033:996616:100007010000701000987918Staphylothermus marinus F1, complete genomeATPase associated with various cellular activities, AAA_51e-1067.4
NC_011766:1078001:109349010934901094407918Desulfurococcus kamchatkensis 1221n chromosome, complete genomeATPase associated with various cellular activities, AAA_52e-0860.8
NC_015422:4508028:452610245261024527013912Alicycliphilus denitrificans K601 chromosome, complete genomeATPase2e-0757
NC_007503:1047577:104901610490161049876861Carboxydothermus hydrogenoformans Z-2901, complete genomeATPase, AAA family3e-0756.2
NC_015422:2326942:232786323278632328777915Alicycliphilus denitrificans K601 chromosome, complete genomeATPase1e-0654.3
NC_014910:2045088:204600920460092046923915Alicycliphilus denitrificans BC chromosome, complete genomeatpase associated with various cellular activities aaa_51e-0654.3
NC_014831:1818968:183570118357011836588888Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-0653.5