Pre_GI: BLASTP Hits

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Query: NC_007333:1457000:1472705 Thermobifida fusca YX, complete genome

Start: 1472705, End: 1473373, Length: 669

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:1173794:117978111797811180461681Verrucosispora maris AB-18-032 chromosome, complete genomecellulose-binding protein1e-62239
NC_005085:2774370:2792035279203527931951161Chromobacterium violaceum ATCC 12472, complete genomecarbohydrate-binding protein2e-22105
NC_013929:2375613:2392612239261223936851074Streptomyces scabiei 87.22 chromosome, complete genomecellulose/chitin binding protein2e-1995.9
NC_016114:1435436:1457402145740214584811080Streptomyces flavogriseus ATCC 33331 chromosome, complete genomechitin-binding protein1e-1790.1
NC_021177:1418213:1435065143506514361291065Streptomyces fulvissimus DSM 40593, complete genomesecreted cellulose-binding protein6e-1787.8
NC_003155:2730469:2749073274907327502481176Streptomyces avermitilis MA-4680, complete genomecellulose binding protein2e-1685.9
NC_013947:3080290:310734831073483108268921Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechitin-binding domain 3 protein1e-1479.7
NC_010572:188500:2032932032932043751083Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative secreted cellulose-binding protein2e-1479
NC_016109:6640000:6653798665379866548981101Kitasatospora setae KM-6054, complete genomeputative cellulose-binding protein2e-1169.3
NC_013947:3347174:336497833649783365571594Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechitin-binding domain 3 protein4e-1168.2
NC_013947:1696671:170058617005861701191606Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechitin-binding domain 3 protein2e-1065.9
NC_017265:3375463:3381955338195533835591605Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative carbohydrate-binding protein5e-0961.2
NC_004088:1075454:1086653108665310882571605Yersinia pestis KIM, complete genomehypothetical protein5e-0961.2
NC_017160:3560153:3567010356701035686141605Yersinia pestis D182038 chromosome, complete genomecarbohydrate-binding protein6e-0960.8
NC_006155:1074298:1086291108629110878951605Yersinia pseudotuberculosis IP 32953, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_005810:754340:7663897663897679931605Yersinia pestis biovar Microtus str. 91001, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_008149:1002453:1013652101365210152561605Yersinia pestis Nepal516, complete genomecarbohydrate-binding protein6e-0961.2
NC_003143:3583468:3590325359032535919291605Yersinia pestis CO92, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_010634:1056441:1068434106843410700381605Yersinia pseudotuberculosis PB1/+, complete genomechitin-binding domain-containing protein6e-0961.2
NC_008150:3015000:3022003302200330236071605Yersinia pestis Antiqua, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_010465:3597000:3603049360304936046531605Yersinia pseudotuberculosis YPIII, complete genomechitin-binding domain 3 protein6e-0961.2
NC_010159:3502350:3509207350920735108111605Yersinia pestis Angola, complete genomechitin binding domain protein6e-0961.2
NC_009381:3228500:3234589323458932361931605Yersinia pestis Pestoides F chromosome, complete genomecarbohydrate-binding protein6e-0961.2
NC_009708:3542336:3549193354919335507971605Yersinia pseudotuberculosis IP 31758 chromosome, complete genomechitin binding domain-containing protein6e-0961.2
NC_014029:3633955:3640812364081236424161605Yersinia pestis Z176003 chromosome, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_017154:3576256:3583113358311335847171605Yersinia pestis D106004 chromosome, complete genomeputative carbohydrate-binding protein6e-0961.2
NC_017168:2158839:2170038217003821716421605Yersinia pestis A1122 chromosome, complete genomechitin binding domain-containing protein6e-0961.2
NC_016047:2150000:215914721591472159767621Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completechitin binding protein4e-0755.1
UCMB5137:1676568:168488716848871685504618Bacillus atrophaeus UCMB-5137chitin binding protein5e-0754.7
NC_014479:2038348:204748120474812048101621Bacillus subtilis subsp. spizizenii str. W23 chromosome, completechitin binding protein8e-0753.9
NC_017191:1568369:157264015726401573260621Bacillus amyloliquefaciens XH7 chromosome, complete genomechitin binding protein2e-0653.1
NC_017188:1567000:157133615713361571956621Bacillus amyloliquefaciens TA208 chromosome, complete genomechitin binding protein2e-0653.1
NC_013929:6371019:638852663885266389143618Streptomyces scabiei 87.22 chromosome, complete genomechitin binding protein2e-0652.4
NC_020064:3998715:4049110404911040505371428Serratia marcescens FGI94, complete genomehypothetical protein3e-0652