Pre_GI: BLASTP Hits

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Query: NC_007333:1457000:1465256 Thermobifida fusca YX, complete genome

Start: 1465256, End: 1465570, Length: 315

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:5170683:517209251720925172409318Klebsiella pneumoniae 342 chromosome, complete genomequaternary ammonium compound-resistance protein SugE7e-1682.4
NC_013850:4993307:499546149954614995778318Klebsiella variicola At-22 chromosome, complete genomesmall multidrug resistance protein7e-1682.4
NC_016845:411844:432140432140432457318Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,quarternary ammonium compound transport protein1e-1582
NC_012731:403670:423636423636423953318Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomequarternary ammonium compound transport protein1e-1582
NC_009648:4958500:497850649785064978823318Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomequarternary ammonium compound transport protein1e-1582
NC_009140:60806:677536775368193441Salmonella enterica enterica sv Newport str. SL254, completequaternary ammonium compound-resistance protein SugE11e-1581.6
NC_009140:60806:741367413674576441Salmonella enterica enterica sv Newport str. SL254, completequaternary ammonium compound-resistance protein SugE21e-1581.6
NC_020181:3518396:352054735205473520864318Enterobacter aerogenes EA1509E, complete genomeQuaternary ammonium compound-resistance protein sugE2e-1581.3
NC_006510:591339:632275632275632595321Geobacillus kaustophilus HTA426, complete genomechaperone protein3e-1580.5
NC_015663:1934863:195033119503311950648318Enterobacter aerogenes KCTC 2190 chromosome, complete genomesmall multidrug resistance protein3e-1580.5
NC_016612:1840325:186020318602031860520318Klebsiella oxytoca KCTC 1686 chromosome, complete genomesmall multidrug resistance protein7e-1579.3
NC_009253:3272000:327410332741033274423321Desulfotomaculum reducens MI-1 chromosome, complete genomesmall multidrug resistance protein6e-1476.3
NC_010511:7024412:705008570500857050405321Methylobacterium sp. 4-46 chromosome, complete genomesmall multidrug resistance protein5e-1476.3
NC_014550:7560:187161871619033318Arthrobacter arilaitensis Re117, complete genomequaternary ammonium compound-resistance protein SugE2e-1374.3
NC_015953:2640500:265221626522162652536321Streptomyces sp. SirexAA-E chromosome, complete genomesmall multidrug resistance protein1e-1271.6
NC_016631:1757788:176772117677211768053333Granulicella mallensis MP5ACTX8 chromosome, complete genomesmall multidrug resistance protein2e-1271.2
NC_007086:557789:577500577500577814315Xanthomonas campestris pv. campestris str. 8004, complete genomeSugE protein2e-1271.2
NC_003902:555699:575410575410575724315Xanthomonas campestris pv. campestris str. ATCC 33913, completeSugE protein2e-1271.2
NC_011894:3090000:309579230957923096112321Methylobacterium nodulans ORS 2060, complete genomesmall multidrug resistance protein2e-1270.9
NC_003888:3138905:315338931533893153709321Streptomyces coelicolor A3(2), complete genomemolecular chaperone3e-1270.5
NC_016114:4614924:462354046235404623860321Streptomyces flavogriseus ATCC 33331 chromosome, complete genomesmall multidrug resistance protein3e-1270.5
NC_015379:3736500:374577337457733746090318Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative quaternary ammonium compound-resistance protein5e-1269.7
NC_016830:3230939:324705332470533247370318Pseudomonas fluorescens F113 chromosome, complete genomeSugE protein5e-1269.7
NC_013744:300000:325888325888326223336Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completesmall multidrug resistance protein6e-1269.3
NC_016626:1825845:185346618534661853777312Burkholderia sp. YI23 plasmid byi_1p, complete sequencesmall multidrug resistance protein1e-1168.9
NC_015953:4908069:491158149115814911904324Streptomyces sp. SirexAA-E chromosome, complete genomesmall multidrug resistance protein4e-1063.5
NC_015954:1662129:167945316794531679776324Halophilic archaeon DL31 chromosome, complete genomesmall multidrug resistance protein1e-0961.6
NC_018080:1730534:173289317328931733207315Pseudomonas aeruginosa DK2 chromosome, complete genometransporter1e-0961.6
NC_002927:1292573:129469312946931295028336Bordetella bronchiseptica RB50, complete genomeputative chaperone2e-0961.2
NC_012660:2045398:204737720473772047691315Pseudomonas fluorescens SBW25 chromosome, complete genomequaternary ammonium compound-resistance protein2e-0961.2
NC_007712:2806500:285065328506532850973321Sodalis glossinidius str. 'morsitans', complete genomeGroEL supressor protein SugE4e-0960.1
NC_011958:735755:757588757588757875288Rhodobacter sphaeroides KD131 chromosome 2, complete genomeSmall multidrug resistance protein8e-0958.9
NC_015658:319296:331326331326331649324Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequencesmall multidrug resistance protein1e-0858.5
NC_014366:1814000:181793518179351818267333Gamma proteobacterium HdN1, complete genomeQuaternary ammonium compound resistance protein4e-0856.6
NC_017192:1841987:186150518615051861831327Arcobacter sp. L, complete genomemultidrug resistance protein6e-0856.2
NC_015572:1974000:199254119925411992861321Methylomonas methanica MC09 chromosome, complete genomesmall multidrug resistance protein2e-0754.7
NC_017506:971482:974058974058974390333Marinobacter adhaerens HP15 chromosome, complete genomesmall multidrug resistance protein5e-0753.1
NC_020995:789665:804728804728805048321Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-0752.8
NC_013169:2045000:205962220596222059939318Kytococcus sedentarius DSM 20547, complete genomecation/cationic drug transporter6e-0752.8
NC_013768:1802313:181707318170731817396324Listeria monocytogenes 08-5923, complete genomesmall multidrug resistance protein, SMR family2e-0650.8
NC_013766:1835964:185034218503421850665324Listeria monocytogenes 08-5578 chromosome, complete genomesmall multidrug resistance protein, SMR family2e-0650.8
NC_008391:1210451:121572012157201216064345Burkholderia cepacia AMMD chromosome 2, complete sequencesmall multidrug resistance protein4e-0650.4
NC_020272:20435:252212522125604384Bacillus amyloliquefaciens IT-45, complete genomeSpermidine export protein mdtJ7e-0649.3