Pre_GI: BLASTN Hits

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Query: NC_007005:5154317 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 5154317, End: 5182838, Length: 28522

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome01156BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-119436BLASTN svgBLASTP svg
NC_002947:12680891268089129343025342Pseudomonas putida KT2440, complete genome4e-101377BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome4e-95357BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome7e-63250BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-44188BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome3e-31145BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-20107BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-20107BLASTN svgBLASTP svg
NC_004578:52691945269194529610426911Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007005:51274145127414515430626893Pseudomonas syringae pv. syringae B728a, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020209:28385822838582285936520784Pseudomonas poae RE*1-1-14, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011985:61003*6100310563344631Agrobacterium radiobacter K84 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-0867.9BLASTN svgBLASTP svg
NC_013961:2861949*2861949288466722719Erwinia amylovora, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008609:25189932518993254286723875Pelobacter propionicus DSM 2379, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005773:1851116*1851116187559924484Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928160:145276*14527616477719502Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:118681*11868113863819958Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011750:156799*15679917601919221Escherichia coli IAI39 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg