Pre_GI: BLASTP Hits

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Query: NC_007005:3684099:3686678 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 3686678, End: 3687811, Length: 1134

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013722:1816561:1845389184538918465071119Xanthomonas albilineans, complete genomeprobable membrane fusion protein2e-38159
NC_020211:996497:1017106101710610182271122Serratia marcescens WW4, complete genomeRND family efflux transporter MFP subunit2e-1273.6
NC_016944:1937645:1937645193764519387391095Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-1170.1
NC_012578:1838470:1838470183847018395641095Vibrio cholerae M66-2 chromosome I, complete sequenceputative periplasmic linker protein2e-1170.1
NC_009457:1444449:1444449144444914455431095Vibrio cholerae O395 chromosome 2, complete sequenceHlyD family secretion protein2e-1170.1
NC_002655:1053082:1051943105194310530851143Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-0963.2
NC_011992:1179084:1179084117908411803371254Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit3e-0859.7
NC_009720:900884:9229089229089240321125Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit7e-0858.5
NC_014500:842493:8455558455558466701116Dickeya dadantii 3937 chromosome, complete genomeRND efflux membrane fusion protein2e-0757
NC_008260:2961291:2979343297934329804161074Alcanivorax borkumensis SK2, complete genomeMultidrug transporter mdtA9e-0755.1
NC_013592:1602242:1601127160112716022451119Dickeya dadantii Ech586, complete genomeefflux transporter, RND family, MFP subunit1e-0654.7
NC_007645:5724000:5727223572722357283051083Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein1e-0654.3
NC_016818:1795576:1840047184004718411381092Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit1e-0654.3
NC_008782:1277117:1277117127711712782741158Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit3e-0653.5
NC_012791:2622923:2643093264309326442861194Variovorax paradoxus S110 chromosome 1, complete genomeefflux transporter, RND family, MFP subunit7e-0652