Pre_GI: BLASTP Hits

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Query: NC_007005:2191500:2200825 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 2200825, End: 2201748, Length: 924

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016622:82418:103229103229104170942Azospirillum lipoferum 4B, complete genomeLysR family transcriptional regulator5e-30131
NC_008061:428501:445939445939446790852Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family5e-22105
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family1e-21103
NC_010515:2358134:237710923771092377960852Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-21103
NC_007511:719493:736224736224737078855Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-2097.8
NC_009439:2337024:235478523547852355639855Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-1996.3
NC_006512:2211654:223007222300722230914843Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, LysR family4e-1995.5
NC_006087:1334500:133839513383951339249855Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LysR family4e-1995.5
NC_015410:2838132:284148928414892842343855Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator1e-1894
NC_012779:2064582:2070273207027320712741002Edwardsiella ictaluri 93-146, complete genomeHTH-type transcriptional regulator PecT1e-1894
NC_003143:2849377:287102128710212871953933Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein2e-1790.5
NC_006155:3040769:306248730624873063419933Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein2e-1790.5
NC_008149:2411161:243283524328352433767933Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein2e-1790.5
NC_017265:1521276:152127615212761522208933Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein2e-1790.5
NC_010159:1861465:188310218831021884031930Yersinia pestis Angola, complete genometranscriptional regulator LrhA1e-1790.5
NC_015379:4282815:428725542872554288142888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-1789
NC_014838:175939:194068194068194949882Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family6e-1788.2
NC_010725:1419272:143411314341131435012900Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family1e-1687.8
NC_020209:945000:960556960556961392837Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator3e-1686.3
NC_015224:3191000:320949632094963210428933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator4e-1685.9
NC_010694:891967:895780895780896682903Erwinia tasmaniensis, complete genomePutative transcriptional regulator protein, LysR family3e-1685.9
NC_011757:4445343:444986244498624450743882Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family5e-1685.5
NC_013592:3397304:341194634119463412842897Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family5e-1685.1
NC_005810:2613456:263510026351002636044945Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator8e-1684.7
NC_010554:1871000:188943718894371890354918Proteus mirabilis HI4320, complete genomeLysR-family transcriptional regulator1e-1584.3
NC_014153:2187409:218740921874092188347939Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, LysR family2e-1583.6
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-1583.2
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator3e-1582.8
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family4e-1582.4
NC_010634:2960000:298038629803862981348963Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator4e-1582.4
NC_010581:561579:580129580129581079951Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family5e-1582
NC_003295:659837:662013662013662882870Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN7e-1581.6
NC_020829:2022000:202767020276702028554885Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator8e-1581.3
NC_012811:1105395:112754111275411128443903Methylobacterium extorquens AM1 megaplasmid, complete sequenceTranscriptional regulator, LysR family9e-1581.3
NC_013971:2478676:248239124823912483320930Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH dehydrogenase operon transcriptional regulator1e-1480.9
NC_013961:2441148:244486324448632445792930Erwinia amylovora, complete genomeprobable HTH-type transcriptional regulator lrhA1e-1480.9
NC_009667:1341000:135994713599471360798852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceLysR family transcriptional regulator1e-1480.5
NC_014618:2139639:215062821506282151503876Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator2e-1480.1
NC_007519:64157:803788037881283906Desulfovibrio alaskensis G20 chromosome, complete genomeLysR family transcriptional regulator2e-1479.7
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator3e-1479.3
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator3e-1479.3
NC_013947:3406000:342305334230533423895843Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family4e-1479
NC_012560:4201969:421861342186134219548936Azotobacter vinelandii DJ, complete genomeBacterial regulatory protein, LysR family4e-1479
NC_021150:4201965:421860942186094219544936Azotobacter vinelandii CA6, complete genomeLysR family regulatory protein4e-1479
NC_007963:2644930:267232126723212673205885Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family4e-1479
NC_008095:2031997:204256720425672043448882Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family7e-1478.2
NC_010725:750911:772714772714773592879Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family1e-1377
NC_008825:404000:406059406059406916858Methylibium petroleiphilum PM1, complete genometranscriptional regulator, LysR family1e-1377
NC_010694:1324250:133909913390991340025927Erwinia tasmaniensis, complete genomeLysR-family transcriptional regulator2e-1376.6
NC_012214:1438476:145355614535561454485930Erwinia pyrifoliae Ep1/96, complete genomeLysR-family transcriptional regulator7e-1375.1
NC_003305:922357:924419924419925270852Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, LysR family2e-1273.6
NC_003063:1128370:114948611494861150337852Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1273.6
NC_006350:1084930:108493010849301085826897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceLysR family transcriptional regulator6e-1271.6
NC_014640:6971000:697104369710436971975933Achromobacter xylosoxidans A8 chromosome, complete genometranscriptional regulator6e-1168.6
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family1e-1067.4
NC_010508:2776283:280057828005782801465888Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-1067
NC_016641:373623:397775397775398656882Paenibacillus terrae HPL-003 chromosome, complete genomeHTH-type transcriptional regulator GltR2e-1066.2
NC_013406:1145268:116005811600581160912855Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator1e-0964.3
NC_016845:2781438:279595527959552796836882Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator LysR1e-0963.9
NC_012731:2739964:275554527555452756426882Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_015379:4249238:425623242562324257098867Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0963.2
NC_020911:1353896:137193913719391372874936Octadecabacter antarcticus 307, complete genomeputative hydrogen peroxide-inducible genes activator OxyR3e-0962.8
NC_013411:2236166:225897722589772259885909Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LysR family8e-0961.2
NC_014915:1376035:139892113989211399829909Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LysR family8e-0961.2
NC_006510:1446490:146725614672561468167912Geobacillus kaustophilus HTA426, complete genometranscription activator of glutamate synthase(LysR family)8e-0961.2
NC_016830:2642881:265919626591962660062867Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_020181:1057476:107625210762521077175924Enterobacter aerogenes EA1509E, complete genomeLysR family transcriptional regulator YdcI1e-0860.5
NC_008321:2569315:257290825729082573792885Shewanella sp. MR-4, complete genometranscriptional regulator, LysR family2e-0860.1
NC_008322:2637646:264124826412482642132885Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family2e-0860.1
NC_013446:2062862:207473420747342075612879Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family2e-0859.7
UCMB5137:1522159:154067815406781541547870Bacillus atrophaeus UCMB-5137YofA4e-0858.9
NC_016593:1527456:154935815493581550269912Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, LysR5e-0858.9
NC_008541:2119883:213613321361332137020888Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0858.5
NC_019673:7797666:780842778084277809335909Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family6e-0858.5
NC_007963:2644930:265185826518582652814957Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family6e-0858.5
NC_010551:1462827:147469114746911475605915Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetranscriptional regulator, LysR family7e-0858.2
NC_010067:1300606:131579913157991316722924Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0858.2
NC_014618:4657719:468652846865284687457930Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_015566:69190:718287182872682855Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_015567:69190:718287182872682855Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_004460:81687:895758957590405831Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator1e-0757.4
NC_014966:638355:646226646226647077852Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator2e-0757
NC_005140:660305:668174668174669025852Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator2e-0757
NC_004129:1741816:176837617683761769269894Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family2e-0757
NC_009832:110239:112502112502113356855Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family2e-0756.6
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-0756.6
NC_003295:199354:236487236487237353867Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0756.6
NC_011094:1683979:168561516856151686538924Salmonella enterica subsp. enterica serovar Schwarzengrund strLysR substrate binding domain-containing protein3e-0756.2
NC_011080:1709612:171124817112481712171924Salmonella enterica subsp. enterica serovar Newport str. SL254,LysR substrate binding domain protein3e-0756.2
NC_011083:1761352:176299717629971763920924Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,LysR substrate binding domain protein3e-0756.2
NC_003197:1713259:171489517148951715818924Salmonella typhimurium LT2, complete genomeputative transcriptional regulator3e-0756.2
NC_011149:1429523:149132514913251492248924Salmonella enterica subsp. enterica serovar Agona str. SL483,LysR substrate binding domain protein3e-0756.2
NC_010102:1388344:140774714077471408670924Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0756.2
NC_016857:1670112:167167916716791672671993Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74LysR family transcriptional regulator3e-0756.2
NC_006905:1726416:172798317279831728975993Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulators, LysR family3e-0756.2
NC_011205:1633353:165278816527881653711924Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853LysR substrate binding domain-containing protein3e-0756.2
NC_011274:1544653:156407315640731564996924Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91LysR family transcriptional regulator3e-0756.2
NC_017046:1669995:167163116716311672554924Salmonella enterica subsp. enterica serovar Typhimurium str. 798LysR-family transcriptional regulatory protein3e-0756.2
NC_016863:1671428:167306416730641673987924Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator3e-0756.2
NC_016860:1710950:171258617125861713509924Salmonella enterica subsp. enterica serovar Typhimurium strLysR family transcriptional regulator3e-0756.2
NC_016856:1723236:172487217248721725795924Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator3e-0756.2
NC_016831:1468691:147032714703271471250924Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative LysR-family transcriptional regulatory protein3e-0756.2
NC_016810:1670112:167174816717481672671924Salmonella enterica subsp. enterica serovar Typhimurium strputative LysR family transcriptional regulatory protein3e-0756.2
NC_012125:2143246:216266221626622163585924Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator3e-0756.2
NC_011294:1493849:151326715132671514190924Salmonella enterica subsp. enterica serovar Enteritidis strLysR family transcriptional regulatory protein3e-0756.2
NC_014650:2417509:242372524237252424627903Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator3e-0755.8
NC_009511:2726296:273916127391612740096936Sphingomonas wittichii RW1 chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_012560:1677798:169286916928691693768900Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, LysR family5e-0755.5
NC_021150:1677811:169288216928821693781900Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, LysR family5e-0755.5
NC_014829:259707:262669262669263559891Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, LysR family4e-0755.5
NC_005810:3493607:351208835120883512969882Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator HdfR7e-0755.1
NC_007645:6858465:686243168624316863306876Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator6e-0755.1
NC_020244:4020315:402223740222374023124888Bacillus subtilis XF-1, complete genomehypothetical protein6e-0755.1
NC_015063:122000:706770677936870Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceLysR family transcriptional regulator1e-0654.3
NC_015063:1:706770677936870Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceLysR family transcriptional regulator1e-0654.3
NC_008149:2773139:277649327764932777362870Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein1e-0653.9
NC_010159:3169266:318233131823313183200870Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family1e-0653.9
NC_008150:905000:920198920198921067870Yersinia pestis Antiqua, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_003143:1691000:170633417063341707203870Yersinia pestis CO92, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_005810:1520000:153523815352381536107870Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator1e-0653.9
NC_015723:384000:384000384000384887888Cupriavidus necator N-1 chromosome 2, complete sequenceLysR family transcriptional regulator1e-0653.9
NC_006677:215466:223068223068224018951Gluconobacter oxydans 621H, complete genomeTranscriptional regulator1e-0653.9
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator2e-0653.9
NC_004088:2937077:294043129404312941300870Yersinia pestis KIM, complete genometranscriptional regulator LYSR-type1e-0653.9
NC_006155:1807902:182435218243521825221870Yersinia pseudotuberculosis IP 32953, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_010634:1809500:182456118245611825430870Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator1e-0653.9
NC_017265:2557476:256083025608302561699870Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative LysR-family transcriptional regulatory protein1e-0653.9
NC_017168:3948514:395186839518683952737870Yersinia pestis A1122 chromosome, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_017160:2054289:205764320576432058512870Yersinia pestis D182038 chromosome, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_017154:1707500:172293217229321723801870Yersinia pestis D106004 chromosome, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_014029:1760948:178083917808391781708870Yersinia pestis Z176003 chromosome, complete genomeputative LysR-family transcriptional regulatory protein1e-0653.9
NC_009708:2788855:279220927922092793078870Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_009381:1655731:165908516590851659954870Yersinia pestis Pestoides F chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_010465:2820500:282265928226592823528870Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LysR family1e-0653.9
NC_007948:517893:518352518352519215864Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family2e-0653.5
NC_011662:131956:148443148443149357915Thauera sp. MZ1T, complete genometranscriptional regulator, LysR family2e-0653.5
NC_013595:4796436:482543748254374826318882Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, LysR family2e-0653.5
NC_015224:1703130:171942717194271720296870Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator2e-0653.1
NC_008497:2038612:205063220506322051540909Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator2e-0653.1
NC_008800:3061484:306483130648313065700870Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator2e-0653.1
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0653.1
NC_019940:2893535:291169629116962912598903Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator3e-0652.8
NC_008463:4743296:476253547625354763419885Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator4e-0652.4
NC_002516:891000:893967893967894851885Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator4e-0652.4
NC_014551:2057971:205797120579712058873903Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (LysR family)4e-0652.4
NC_007511:2072838:209585220958522096709858Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0652.4
NC_017190:2002718:200271820027182003635918Bacillus amyloliquefaciens LL3 chromosome, complete genomeLysR family transcriptional regulator4e-0652.4
NC_014815:4621552:464174646417464642708963Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, lysr family5e-0652
NC_008060:476861:498577498577499497921Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0652
NC_008542:1021848:104322410432241044144921Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0652
NC_010508:981377:996474996474997394921Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0651.6
NC_015381:1318818:133827613382761339097822Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator7e-0651.6
NC_006270:568171:585738585738586619882Bacillus licheniformis ATCC 14580, complete genomeputative regulatory protein9e-0651.2
NC_006322:567987:585528585528586409882Bacillus licheniformis ATCC 14580, complete genomehypothetical protein9e-0651.2