Pre_GI: BLASTP Hits

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Query: NC_007005:1636875:1643627 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 1643627, End: 1644184, Length: 558

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5373886:542417254241725424723552Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-62237
NC_010002:4544818:455964445596444560249606Delftia acidovorans SPH-1, complete genomeLytic transglycosylase catalytic2e-50198
NC_010170:4533416:453615045361504536755606Bordetella petrii, complete genomeconserved exported protein2e-50198
NC_010170:1498253:153267115326711533261591Bordetella petrii, complete genomeconserved exported protein6e-50196
NC_011901:2983555:298297429829742983558585Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelytic transglycosylase7e-50196
NC_009138:1974935:201218120121812012771591Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-49194
NC_006513:1379735:145965414596541460235582Azoarcus sp. EbN1, complete genomehypothetical protein3e-49194
NC_008782:2326439:234502623450262345646621Acidovorax sp. JS42, complete genomeLytic transglycosylase, catalytic3e-49194
NC_011992:1234610:123678112367811237371591Acidovorax ebreus TPSY, complete genomeLytic transglycosylase catalytic3e-49194
NC_008825:2525380:254374625437462544366621Methylibium petroleiphilum PM1, complete genomehypothetical protein7e-49193
NC_018080:5091772:515278751527875153368582Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-48192
NC_003919:2639080:263908026390802639691612Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-48192
NC_015422:1876102:187610218761021876722621Alicycliphilus denitrificans K601 chromosome, complete genomelytic transglycosylase catalytic subunit2e-48191
NC_008752:558828:573364573364573972609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLytic transglycosylase, catalytic2e-48191
NC_009656:4527457:462777946277794628360582Pseudomonas aeruginosa PA7 chromosome, complete genomesoluble lytic murein transglycosylase3e-48191
NC_012691:2614603:265685726568572657447591Tolumonas auensis DSM 9187, complete genomeLytic transglycosylase catalytic4e-48190
NC_011662:1058794:106148910614891062109621Thauera sp. MZ1T, complete genomeLytic transglycosylase catalytic8e-48189
NC_012912:483390:515976515976516566591Dickeya zeae Ech1591, complete genomeputative signal peptide1e-47189
NC_008344:49039:969949699497584591Nitrosomonas eutropha C91, complete genomeLytic transglycosylase, catalytic4e-47187
NC_012731:600518:617570617570618088519Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-38158
NC_016830:3869572:392583039258303926225396Pseudomonas fluorescens F113 chromosome, complete genomeSoluble lytic murein transglycosylase subunit6e-38156
NC_014532:3555550:357369035736903574481792Halomonas elongata DSM 2581, complete genomelytic transglycosylase, catalytic8e-38156
NC_020181:3328844:334511033451103345643534Enterobacter aerogenes EA1509E, complete genomeFIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)2e-32138
NC_016845:4539381:454202745420274542596570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-31135
NC_009708:4182460:419818641981864198824639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransglycosylase7e-31133
NC_004547:611178:624021624021624608588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-29128
NC_009832:358291:375841375841376533693Serratia proteamaculans 568, complete genomeLytic transglycosylase catalytic1e-27122
NC_014029:331919:360482360482361174693Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-27121
NC_015567:313035:330460330460331146687Serratia sp. AS9 chromosome, complete genomelytic transglycosylase catalytic subunit3e-27120
NC_015566:316340:330295330295330981687Serratia sp. AS12 chromosome, complete genomelytic transglycosylase catalytic subunit3e-27120
NC_013716:3512950:354301235430123543440429Citrobacter rodentium ICC168, complete genome5e-24110
NC_015572:2186394:219838421983842198950567Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit5e-22103
NC_007484:667879:677299677299677862564Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase, catalytic9e-2096.3
NC_017062:547317:569324569324570112789Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein1e-1375.9
NC_010125:1651687:167257916725791673541963Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transglycosylase3e-1168.2
NC_010554:2646806:265392226539222654470549Proteus mirabilis HI4320, complete genomephage transglycosylase2e-0962.4
NC_009937:673820:694129694129694668540Azorhizobium caulinodans ORS 571, complete genomehypothetical transmembrane protein3e-0961.2
NC_015850:2048251:208841620884162089186771Acidithiobacillus caldus SM-1 chromosome, complete genomemembrane bound transglycosylase family protein5e-0960.5
NC_007626:2354260:239560523956052396444840Magnetospirillum magneticum AMB-1, complete genomeSoluble lytic murein transglycosylase and related regulatory protein6e-0857.4