Pre_GI: BLASTP Hits

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Query: NC_006905:848000:865001 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 865001, End: 865753, Length: 753

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:793812:813561813561814313753Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphoglyceromutase8e-135479
NC_011080:819103:840714840714841466753Salmonella enterica subsp. enterica serovar Newport str. SL254,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase8e-135479
NC_003197:815964:836363836363837115753Salmonella typhimurium LT2, complete genomephosphoglyceromutase2e-134478
NC_011083:862901:884631884631885383753Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-134478
NC_011149:779903:800022800022800774753Salmonella enterica subsp. enterica serovar Agona str. SL483,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-134478
NC_011274:793681:813373813373814125753Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phosphoglyceromutase2e-134478
NC_011294:781170:795511795511796263753Salmonella enterica subsp. enterica serovar Enteritidis strphosphoglyceromutase2e-134478
NC_016810:819489:835617835617836369753Salmonella enterica subsp. enterica serovar Typhimurium strphosphoglycerate mutase2e-134478
NC_016856:819482:836703836703837455753Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphosphoglyceromutase2e-134478
NC_016857:819429:835617835617836369753Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phosphoglyceromutase2e-134478
NC_016860:857500:875191875191875943753Salmonella enterica subsp. enterica serovar Typhimurium strphosphoglycerate mutase2e-134478
NC_016863:819478:836703836703837455753Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phosphoglyceromutase2e-134478
NC_017046:819414:835605835605836357753Salmonella enterica subsp. enterica serovar Typhimurium str. 798phosphoglycerate mutase2e-134478
NC_011205:839425:860544860544861296753Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phosphoglyceromutase1e-134478
NC_012947:3015985:303638230363823037134753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphoglyceromutase1e-131469
NC_009648:838000:854248854248855000753Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomephosphoglyceromutase1e-129462
NC_012214:2673058:267816126781612678913753Erwinia pyrifoliae Ep1/96, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase5e-122436
NC_013971:1283942:130225113022511303003753Erwinia amylovora ATCC 49946 chromosome, complete genome2,3-bisphosphoglycerate-independent phosphoglycerate mutase2e-121435
NC_013961:1246454:126472112647211265473753Erwinia amylovora, complete genomephosphoglyceromutase 12e-121435
NC_010694:2565580:257069725706972571449753Erwinia tasmaniensis, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase4e-121434
NC_011026:2533017:257603725760372576786750Chloroherpeton thalassium ATCC 35110, complete genomephosphoglycerate mutase 1 family3e-93341
NC_015436:474710:498161498161498910750Spirochaeta coccoides DSM 17374 chromosome, complete genomephosphoglycerate mutase6e-92337
NC_011832:619874:632141632141632890750Candidatus Methanosphaerula palustris E1-9c, complete genomephosphoglycerate mutase 1 family7e-86317
NC_010673:703816:703816703816704562747Borrelia hermsii DAH, complete genomephosphoglycerate mutase3e-84311
NC_010524:3914880:392725439272543927997744Leptothrix cholodnii SP-6, complete genomephosphoglycerate mutase 1 family4e-84311
NC_006156:685344:699508699508700254747Borrelia garinii PBi chromosome linear, complete sequencephosphoglycerate mutase2e-80298
NC_011146:3991683:401179640117964012500705Geobacter bemidjiensis Bem, complete genomephosphoglycerate mutase 1 family4e-80297
NC_002488:1775629:180104418010441801793750Xylella fastidiosa 9a5c, complete genomephosphoglyceromutase1e-76286
NC_009513:169146:173678173678174364687Lactobacillus reuteri F275, complete genomephosphoglycerate mutase4e-73274
NC_015697:1295412:129990012999001300586687Lactobacillus reuteri SD2112 chromosome, complete genomephosphoglycerate mutase4e-73274
NC_013203:472679:493285493285494046762Atopobium parvulum DSM 20469, complete genomephosphoglycerate mutase 1 family2e-72271
NC_003116:1734000:174539517453951746078684Neisseria meningitidis Z2491, complete genomephosphoglyceromutase4e-71267
NC_015978:352478:357064357064357762699Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 24e-69261
NC_017219:2372000:237748023774802378220741Bifidobacterium longum subsp. infantis ATCC 15697, complete genomephosphoglyceromutase2e-68258
NC_011593:2372362:237766223776622378402741Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phosphoglyceromutase2e-68258
NC_012913:2074126:207469220746922075375684Aggregatibacter aphrophilus NJ8700, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase3e-68258
NC_008309:1628939:163173416317341632417684Haemophilus somnus 129PT, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-67255
NC_004369:437594:457968457968458720753Corynebacterium efficiens YS-314, complete genomephosphoglyceromutase5e-67254
NC_016816:4129299:416536841653684166141774Pantoea ananatis LMG 5342, complete genome2,3-bisphosphoglycerate-independent phosphoglycerate mutase1e-66252
NC_014304:77715:927669276693467702Erwinia billingiae Eb661 plasmid pEB102, complete sequence2,3-bisphosphoglycerate-dependent phosphoglycerate mutase6e-66250
NC_020133:902000:920408920408921163756Mycobacterium liflandii 128FXT, complete genomephosphoglycerate mutase 1 Gpm16e-64244
NC_010612:957786:976692976692977447756Mycobacterium marinum M, complete genomephosphoglycerate mutase 1 Gpm16e-64243
NC_003888:4613000:461802046180204618781762Streptomyces coelicolor A3(2), complete genomephosphoglyceromutase9e-63239
NC_015587:1414304:141828114182811419024744Hydrogenobaculum sp. SHO chromosome, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase1e-61236
NC_015557:1412917:141841314184131419156744Hydrogenobaculum sp. 3684 chromosome, complete genomephosphoglycerate mutase 1 family1e-61236
NC_011126:1430608:143611314361131436856744Hydrogenobaculum sp. Y04AAS1, complete genomephosphoglycerate mutase 1 family2e-61235
NC_010999:2483000:248320324832032483874672Lactobacillus casei, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase5e-50197
NC_015978:412856:438783438783439484702Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 12e-47188
NC_013199:2386924:239061323906132391284672Lactobacillus rhamnosus Lc 705, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 (Phosphoglyceromutase 1) (PGAM1) (BPG-dependent PGAM1) (dPGM 1)1e-45182
NC_011894:2747491:275266027526602753301642Methylobacterium nodulans ORS 2060, complete genomephosphoglycerate mutase 1 family1e-43176
NC_008095:6877388:687882668788266879434609Myxococcus xanthus DK 1622, complete genomeputative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-43175
NC_020126:7896447:791296679129667913574609Myxococcus stipitatus DSM 14675, complete genome2,3-bisphosphoglycerate-independent phosphoglycerate mutase1e-42173
NC_012988:1817000:183663818366381837276639Methylobacterium extorquens DM4, complete genomephosphoglyceromutase1e-41169
NC_011757:1553500:157309015730901573728639Methylobacterium chloromethanicum CM4, complete genomephosphoglycerate mutase 1 family1e-41169
NC_010505:5583000:558984955898495590526678Methylobacterium radiotolerans JCM 2831, complete genomePhosphoglycerate mutase5e-33141
NC_014121:489500:501699501699502022324Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephosphoglyceromutase 13e-2099
NC_012988:1777618:180088418008841801237354Methylobacterium extorquens DM4, complete genomephosphoglycerate/bisphosphoglycerate mutase3e-1478.6
NC_014632:567289:579421579421580011591Ilyobacter polytropus DSM 2926 chromosome, complete genomephosphoglycerate mutase2e-1376.3
NC_016148:576946:580073580073580726654Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase2e-1169.7
NC_014654:302000:321570321570322190621Halanaerobium sp. 'sapolanicus' chromosome, complete genomePhosphoglycerate mutase1e-1067
NC_016148:141011:155390155390156040651Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase2e-1066.6
NC_008261:64678:932619326193884624Clostridium perfringens ATCC 13124, complete genomephosphoglycerate mutase family protein5e-1065.1
NC_014246:1545214:154658415465841547219636Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative phosphoglycerate mutase3e-0962.4
NC_014657:1193985:119656011965601197174615Caldicellulosiruptor owensensis OL chromosome, complete genomephosphoglycerate mutase4e-0962
NC_015437:1038476:104379310437931044422630Selenomonas sputigena ATCC 35185 chromosome, complete genomePhosphoglycerate mutase5e-0961.6
NC_014844:3582677:359560035956003596292693Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephosphoglycerate mutase6e-0961.2
NC_001263:1378605:139765613976561398369714Deinococcus radiodurans R1 chromosome 1, complete sequencephosphoglycerate mutase, putative8e-0960.8
NC_015634:2492771:249465324946532495273621Bacillus coagulans 2-6 chromosome, complete genomephosphoglycerate mutase1e-0860.1
NC_004557:2777291:278442427844242785065642Clostridium tetani E88, complete genomephosphoglycerate mutase2e-0860.1
NC_010407:3174470:317556131755613176313753Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative phosphoglycerate mutase2e-0859.3
NC_016513:1529691:153201315320131532654642Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphoglycerate mutase family protein2e-0859.3
NC_011837:165913:180513180513181148636Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-0858.5
NC_009706:165913:180513180513181148636Clostridium kluyveri DSM 555 chromosome, complete genomeprotein CobC15e-0858.5
NC_015635:3860570:389086438908643891490627Microlunatus phosphovorus NM-1, complete genomephosphoglycerate mutase family protein7e-0857.8
NC_006510:1501487:150620815062081506846639Geobacillus kaustophilus HTA426, complete genomephosphoglycerate mutase1e-0757.4
NC_015687:1508664:152869015286901529265576Clostridium acetobutylicum DSM 1731 chromosome, complete genomealpha-ribazole-5'-phosphate phosphatase, CobC9e-0857.4
NC_003030:1510000:152708915270891527664576Clostridium acetobutylicum ATCC 824, complete genomeAlpha-ribazole-5'-phosphate phosphatase, CobC9e-0857.4
NC_017295:1507956:152650315265031527078576Clostridium acetobutylicum EA 2018 chromosome, complete genomeAlpha-ribazole-5'-phosphate phosphatase, CobC9e-0857.4
NC_016627:2723678:273140727314072732099693Clostridium clariflavum DSM 19732 chromosome, complete genomefructose-2,6-bisphosphatase2e-0756.6
NC_013192:232778:268893268893269537645Leptotrichia buccalis DSM 1135, complete genomePhosphoglycerate mutase2e-0756.2
NC_012814:1856632:185873718587371859405669Bifidobacterium animalis subsp. lactis Bl-04, complete genomeBroad specificity phosphatase2e-0756.2
NC_002950:1571383:1588609158860915899251317Porphyromonas gingivalis W83, complete genomephosphoribosyltransferase, putative/phosphoglycerate mutase family protein4e-0755.5
NC_013766:1202713:120346012034601204035576Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-0755.5
NC_020304:2107979:210915121091512109813663Desulfocapsa sulfexigens DSM 10523, complete genomefructose-2,6-bisphosphatase3e-0755.5
NC_013956:595320:625149625149625763615Pantoea ananatis LMG 20103 chromosome, complete genomeGpmB5e-0754.7
NC_005126:3485330:348533034853303485947618Photorhabdus luminescens subsp. laumondii TTO1, complete genomeAlpha-ribazole-5'-phosphate phosphatase6e-0754.7
NC_012438:192065:207795207795208415621Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomephosphoglycerate mutase7e-0754.3
NC_014655:379937:391353391353391940588Leadbetterella byssophila DSM 17132 chromosome, complete genomephosphoglycerate mutase1e-0653.9
NC_012488:1159463:116150511615051162080576Listeria monocytogenes Clip81459, complete genomealpha-ribazole-5'-phosphatase9e-0753.9
NC_014650:2500817:251810025181002518738639Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphoglycerate mutase1e-0653.5
NC_014363:427393:448600448600449223624Olsenella uli DSM 7084 chromosome, complete genomePhosphoglycerate mutase2e-0652.8
NC_018524:444217:449578449578450201624Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehistidine phosphatase super family protein3e-0652.4
NC_015433:285581:299882299882300577696Streptococcus suis ST3 chromosome, complete genomeputative phosphoglycerate mutase3e-0652.4
NC_011898:702983:716250716250716936687Clostridium cellulolyticum H10, complete genomePhosphoglycerate mutase3e-0652.4
NC_015520:224136:232085232085232681597Mahella australiensis 50-1 BON chromosome, complete genomephosphoglycerate mutase6e-0651.6
NC_016630:1462788:147577714757771476403627Filifactor alocis ATCC 35896 chromosome, complete genomephosphoglycerate mutase5e-0651.6
NC_012925:275704:288892288892289587696Streptococcus suis P1/7, complete genomephosphoglycerate mutase family protein5e-0651.6
NC_009442:277392:288530288530289225696Streptococcus suis 05ZYH33 chromosome, complete genomephosphoglycerate mutase5e-0651.6
NC_009443:277246:288384288384289079696Streptococcus suis 98HAH33, complete genomephosphoglycerate mutase5e-0651.6
NC_012924:277325:288457288457289152696Streptococcus suis SC84, complete genomephosphoglycerate mutase family protein5e-0651.6
NC_013517:1055854:111152311115231112161639Sebaldella termitidis ATCC 33386, complete genomePhosphoglycerate mutase7e-0651.2