Pre_GI: BLASTP Hits

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Query: NC_006905:848000:858769 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 858769, End: 860544, Length: 1776

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:793812:8073268073268091011776Salmonella enterica subsp. enterica serovar Paratyphi C strainoxaloacetate decarboxylase01130
NC_016857:819429:8293858293858311601776Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pyruvate carboxylase subunit B01129
NC_016810:819489:8293858293858311601776Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit alpha01129
NC_016856:819482:8304718304718322461776Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S01127
NC_016860:857500:8689598689598707341776Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase01127
NC_017046:819414:8293708293708311451776Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxaloacetate decarboxylase subunit alpha01126
NC_011274:793681:8071718071718089431773Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91oxaloacetate decarboxylase01123
NC_011205:839425:8543158543158560871773Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxaloacetate decarboxylase01123
NC_011149:779903:7938077938077955761770Salmonella enterica subsp. enterica serovar Agona str. SL483,oxaloacetate decarboxylase alpha subunit01119
NC_011294:781170:7892857892857910541770Salmonella enterica subsp. enterica serovar Enteritidis stroxaloacetate decarboxylase01118
NC_010102:2287934:2292299229229922940681770Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01114
NC_011080:819103:8344828344828362571776Salmonella enterica subsp. enterica serovar Newport str. SL254,oxaloacetate decarboxylase alpha subunit01087
NC_011083:862901:8783688783688801371770Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxaloacetate decarboxylase alpha subunit01075
NC_013850:4612812:4612812461281246145811770Klebsiella variicola At-22 chromosome, complete genomeoxaloacetate decarboxylase alpha subunit01053
NC_009648:838000:8503588503588521241767Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeoxaloacetate decarboxylase01048
NC_011283:4767269:4767269476726947690381770Klebsiella pneumoniae 342 chromosome, complete genomeoxaloacetate decarboxylase01041
NC_016831:2209834:2214189221418922159731785Salmonella enterica subsp. enterica serovar Gallinarum/pullorumoxaloacetate decarboxylase subunit alpha0952
NC_021150:201237:2012372012372030361800Azotobacter vinelandii CA6, complete genomepyruvate carboxylase subunit B2e-158559
NC_012560:201237:2012372012372030361800Azotobacter vinelandii DJ, complete genomepyruvate carboxylase subunit B2e-158559
NC_016627:1723104:1723603172360317250001398Clostridium clariflavum DSM 19732 chromosome, complete genomepyruvate/oxaloacetate carboxyltransferase6e-154544
NC_008553:1858558:1877509187750918792121704Methanosaeta thermophila PT, complete genomeoxaloacetate decarboxylase alpha subunit2e-150533
NC_014002:631649:6500216500216517511731Methanohalophilus mahii DSM 5219 chromosome, complete genomepyruvate carboxylase subunit B1e-149530
NC_010506:2146444:2161899216189921636891791Shewanella woodyi ATCC 51908, complete genomeConserved carboxylase region2e-149529
NC_014964:1169925:1187207118720711886041398Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeConserved carboxylase region4e-149528
NC_010321:1177238:1195016119501611964131398Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeoxaloacetate decarboxylase4e-149528
NC_010320:1585974:1601485160148516028821398Thermoanaerobacter sp. X514 chromosome, complete genomeoxaloacetate decarboxylase1e-148527
NC_014538:1311500:1311500131150013128971398Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein1e-148527
NC_020134:1173000:1192680119268011940741395Clostridium stercorarium subsp. stercorarium DSM 8532, completepyruvate carboxylase subunit B6e-147521
NC_014926:1483974:1498947149894715008031857Thermovibrio ammonificans HB-1 chromosome, complete genomeoxaloacetate decarboxylase alpha subunit6e-139494
NC_013926:1166454:1181403118140311828301428Aciduliprofundum boonei T469 chromosome, complete genomeConserved carboxylase region2e-138493
NC_011146:382719:4099364099364114411506Geobacter bemidjiensis Bem, complete genomeconserved carboxylase domain protein2e-135483
NC_014657:1193985:1193985119398511953761392Caldicellulosiruptor owensensis OL chromosome, complete genomeconserved carboxylase region2e-134479
NC_017316:2710021:2725327272532727267241398Enterococcus faecalis OG1RF chromosome, complete genomeoxaloacetate decarboxylase5e-133474
NC_004668:3184319:3203965320396532053621398Enterococcus faecalis V583, complete genomeoxaloacetate decarboxylase5e-133474
NC_014632:336000:3416913416913430731383Ilyobacter polytropus DSM 2926 chromosome, complete genomepyruvate carboxylase2e-128460
NC_015873:63487:8399583995853441350Megasphaera elsdenii DSM 20460, complete genomeHMGL-like protein2e-127456
NC_013192:2434664:2434664243466424360431380Leptotrichia buccalis DSM 1135, complete genomepyruvate carboxyltransferase1e-125450
NC_011126:555483:5634965634965653551860Hydrogenobaculum sp. Y04AAS1, complete genomeoxaloacetate decarboxylase alpha subunit2e-118426
NC_020411:1333352:1343484134348413454001917Hydrogenobaculum sp. HO, complete genomeConserved carboxylase region4e-116419
NC_015557:1333158:1343290134329013452061917Hydrogenobaculum sp. 3684 chromosome, complete genomePyruvate carboxylase4e-116419
NC_011126:1345984:1353258135325813551741917Hydrogenobaculum sp. Y04AAS1, complete genomeOxaloacetate decarboxylase1e-115417
NC_015738:629297:6453906453906472821893Eggerthella sp. YY7918, complete genomehypothetical protein5e-109395
NC_013204:2955500:2974093297409329759821890Eggerthella lenta DSM 2243, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-108393
NC_010376:1742752:1742752174275217461713420Finegoldia magna ATCC 29328, complete genomepyruvate carboxylase2e-93343
NC_008609:1394377:1411949141194914153953447Pelobacter propionicus DSM 2379, complete genomepyruvate carboxylase2e-89330
NC_016605:50695:7525475254786853432Pediococcus claussenii ATCC BAA-344 chromosome, complete genomepyruvate carboxylase2e-86320
NC_018664:1279950:1288125128812512915533429Clostridium acidurici 9a chromosome, complete genomepyruvate carboxylase Pyc1e-84314
NC_008525:270310:2910552910552944803426Pediococcus pentosaceus ATCC 25745, complete genomePyruvate carboxylase5e-84312
NC_014614:6115:2681926819302533435Clostridium sticklandii, complete genomepyruvate carboxylase2e-83310
NC_013316:1:3465234652380833432Clostridium difficile R20291, complete genomepyruvate carboxylase6e-79295
NC_009633:587562:6028766028766063163441Alkaliphilus metalliredigens QYMF chromosome, complete genomepyruvate carboxylase1e-78294
NC_017190:1465079:1516747151674715201933447Bacillus amyloliquefaciens LL3 chromosome, complete genomepyruvate carboxylase6e-77288
NC_017955:3057592:3071004307100430743573354Modestobacter marinus, complete genomehypothetical protein2e-70267
NC_008148:2053467:2066496206649620698823387Rubrobacter xylanophilus DSM 9941, complete genomepyruvate carboxylase1e-69264
NC_008595:312861:3349863349863383693384Mycobacterium avium 104, complete genomepyruvate carboxylase4e-68259
NC_002944:292974:3108253108253142083384Mycobacterium avium subsp. paratuberculosis K-10, complete genomePca1e-67257
NC_020126:5152359:5170456517045651739593504Myxococcus stipitatus DSM 14675, complete genomepropionyl-CoA carboxylase subunit alpha3e-67256
NC_014935:1223817:1255211125521112570221812Nitratifractor saLSUginis DSM 16511 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein1e-53211
NC_013757:3717500:3722314372231437239871674Geodermatophilus obscurus DSM 43160, complete genome5e-52206
NC_011768:3854455:3870119387011938720471929Desulfatibacillum alkenivorans AK-01, complete genomeOxaloacetate decarboxylase4e-42172
NC_014933:3637172:3653556365355636553881833Bacteroides helcogenes P 36-108 chromosome, complete genomePyruvate carboxylase5e-36152
NC_013223:2609697:2622651262265126263403690Desulfohalobium retbaense DSM 5692, complete genomeCarbamoyl-phosphate synthase L chain ATP- binding5e-30133
NC_020409:437781:4409174409174446273711Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCarbamoyl-phosphate synthase L chain ATP-binding2e-26120
NC_017192:2505369:2527445252744525284731029Arcobacter sp. L, complete genome4-hydroxy-2-oxovalerate aldolase1e-1172
NC_013887:812091:8258038258038273591557Methanocaldococcus sp. FS406-22 chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase3e-1170.9
NC_007503:1111457:1140042114004211410521011Carboxydothermus hydrogenoformans Z-2901, complete genome4-hydroxy-2-ketovalerate aldolase5e-1169.7
NC_018876:2760000:2776832277683227780041173Methanolobus psychrophilus R15 chromosome, complete genome2-isopropylmalate synthase3e-1067.4
NC_013156:226215:2383302383302398861557Methanocaldococcus fervens AG86, complete genomeisopropylmalate/citramalate/homocitrate synthase4e-1067
NC_000909:1123161:1137352113735211389081557Methanocaldococcus jannaschii DSM 2661, complete genome2-isopropylmalate synthase8e-1065.9
NC_009922:490500:498615498615498998384Alkaliphilus oremlandii OhILAs, complete genomebiotin/lipoyl attachment domain-containing protein2e-0964.3
NC_016825:158626:1684231684231720373615Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12allophanate hydrolase subunit 25e-0963.2
NC_004547:1600900:1622382162238216234131032Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4-hydroxy-2-ketovalerate aldolase5e-0963.2
NC_015437:572788:576562576562576948387Selenomonas sputigena ATCC 35185 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein8e-0962.8
NC_018697:505915:5210545210545220791026Cycloclasticus sp. P1 chromosome, complete genome4-hydroxy-2-oxovalerate aldolase NahM2e-0861.2
NC_013508:2130681:214523821452382146176939Edwardsiella tarda EIB202, complete genomeputative hydroxymethylglutaryl-CoA lyase3e-0860.8
NC_009832:3313058:3328606332860633296071002Serratia proteamaculans 568, complete genomepyruvate carboxyltransferase3e-0860.8
NC_015573:649800:6515296515296525571029Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome4-hydroxy-2-oxovalerate aldolase5e-0860.1
NC_013967:1375255:1377383137738313787051323Haloferax volcanii DS2 chromosome, complete genome2-isopropylmalate synthase7e-0859.3
NC_014122:393856:4129364129364144711536Methanocaldococcus infernus ME chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase1e-0758.5
NC_017192:1841987:1863541186354118671373597Arcobacter sp. L, complete genomeurea carboxylase3e-0757.8
NC_012881:478042:4894504894504905561107Desulfovibrio salexigens DSM 2638, complete genomepyruvate carboxyltransferase2e-0757.8
NC_004668:3184319:321093432109343211335402Enterococcus faecalis V583, complete genomeacetyl-CoA carboxylase2e-0757.8
NC_013642:505518:514444514444514842399Thermotoga naphthophila RKU-10, complete genomebiotin/lipoyl attachment domain-containing protein3e-0757.4
NC_014209:1580423:1596154159615415977161563Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,2-isopropylmalate synthase/homocitrate synthase family protein4e-0757
NC_007333:1411050:1430641143064114324101770Thermobifida fusca YX, complete genomeputative acyl-CoA carboxylase complex A subunit4e-0757
NC_010617:1910388:1922977192297719247881812Kocuria rhizophila DC2201, complete genomeacyl-CoA carboxylase alpha chain5e-0756.6
NC_008269:868000:8878958878958896761782Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencebiotin carboxylase5e-0756.6
NC_000868:834872:853742853742854179438Pyrococcus abyssi GE5, complete genomemethylmalonyl-CoA decarboxylase gamma chain5e-0756.6
NC_019970:2263427:2268513226851322696641152Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehomocitrate synthase NifV6e-0756.6
NC_008700:1627401:164666716466671647557891Shewanella amazonensis SB2B, complete genomepyruvate carboxyltransferase6e-0756.2
NC_009718:1411793:142557614255761426019444Fervidobacterium nodosum Rt17-B1, complete genomebiotin/lipoyl attachment domain-containing protein6e-0756.2
NC_021171:2019755:2019755201975520207771023Bacillus sp. 1NLA3E, complete genome4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase8e-0755.8
NC_010085:1174917:1183825118382511850061182Nitrosopumilus maritimus SCM1, complete genomepyruvate carboxyltransferase8e-0755.8
NC_013440:9146562:916723091672309167739510Haliangium ochraceum DSM 14365, complete genomebiotin/lipoyl attachment domain-containing protein9e-0755.8
NC_016943:4194002:422878442287844228993210Blastococcus saxobsidens DD2, complete genomepyruvate carboxylase9e-0755.8
NC_013316:891782:895342895342896238897Clostridium difficile R20291, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-0655.5
NC_013315:895500:897727897727898623897Clostridium difficile CD196 chromosome, complete genomehydroxymethylglutaryl-CoA lyase1e-0655.5
NC_017179:905347:907504907504908400897Clostridium difficile BI1, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-0655.5
NC_020134:1173000:119218211921821192604423Clostridium stercorarium subsp. stercorarium DSM 8532, completebiotin/lipoyl attachment domain-containing protein1e-0655.5
NC_008148:1711679:1726579172657917285371959Rubrobacter xylanophilus DSM 9941, complete genomeCarbamoyl-phosphate synthase L chain, ATP-binding protein1e-0655.5
NC_015379:1600715:1619958161995816235873630Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Urea carboxylase (Allophanate hydrolase subunit 2)2e-0655.1
NC_016593:762216:788713788713789612900Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completepyruvate carboxyltransferase2e-0655.1
NC_015573:1671000:1673841167384116750071167Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehomocitrate synthase1e-0655.1
NC_014974:1076565:1098692109869210997351044Thermus scotoductus SA-01 chromosome, complete genome4-hydroxy-2-oxovalerate aldolase1e-0655.1
NC_008260:2142311:2165432216543221690193588Alcanivorax borkumensis SK2, complete genomeurea carboxylase/allophanate hydrolase1e-0655.1
NC_015555:277364:284799284799285179381Thermoanaerobacterium xylanolyticum LX-11 chromosome, completebiotin/lipoyl attachment domain-containing protein1e-0655.1
NC_009954:1893206:1896448189644818975151068Caldivirga maquilingensis IC-167, complete genome2-isopropylmalate synthase1e-0655.1
NC_018691:761560:7788897788897825453657Alcanivorax dieselolei B5 chromosome, complete genomeUrea amidolyase2e-0654.7
NC_013921:1614397:1631536163153616330981563Thermoanaerobacter italicus Ab9 chromosome, complete genome2-isopropylmalate synthase/homocitrate synthase family protein2e-0654.7
NC_015216:2113556:2114881211488121160561176Methanobacterium sp. AL-21 chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase2e-0654.7
NC_014916:22644:293372933730221885Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequencepyruvate carboxyltransferase3e-0654.3
NC_013412:33834:145414542338885Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequencepyruvate carboxyltransferase3e-0654.3
NC_009089:965959:968115968115969011897Clostridium difficile 630, complete genomeputative hydroxymethylglutaryl-CoA lyase3e-0654.3
NC_015958:2361551:236578923657892366187399Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein3e-0654.3
NC_007181:1094422:1111101111110111125071407Sulfolobus acidocaldarius DSM 639, complete genome2-isopropylmalate synthase3e-0654.3
NC_011978:1812000:182403118240311824444414Thermotoga neapolitana DSM 4359, complete genomeBiotin/lipoyl attachment domain-containing protein3e-0654.3
NC_015555:1989463:1996596199659619977471152Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehomocitrate synthase2e-0654.3
NC_019964:1873167:1894081189408118959191839Halovivax ruber XH-70, complete genomeacetyl/propionyl-CoA carboxylase, alpha subunit3e-0653.9
NC_013791:2273389:228100322810032281917915Bacillus pseudofirmus OF4 chromosome, complete genomehydroxymethylglutaryl-CoA lyase3e-0653.9
NC_020210:661236:670371670371671270900Geobacillus sp. GHH01, complete genomehydroxymethylglutaryl-CoA lyase6e-0653.1
NC_010320:819326:833187833187833585399Thermoanaerobacter sp. X514 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein5e-0653.1
NC_007796:2607240:2612459261245926138981440Methanospirillum hungatei JF-1, complete genomepyruvate carboxyltransferase5e-0653.1
NC_014364:4488875:4511991451199145130041014Spirochaeta smaragdinae DSM 11293 chromosome, complete genome4-hydroxy-2-oxovalerate aldolase7e-0652.8
NC_019978:224619:2454822454822469841503Halobacteroides halobius DSM 5150, complete genome2-isopropylmalate synthase, bacterial type7e-0652.8
NC_010003:1724500:1732073173207317336051533Petrotoga mobilis SJ95, complete genome2-isopropylmalate synthase8e-0652.8
NC_014633:837588:866130866130866525396Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencebiotin/lipoyl attachment domain-containing protein1e-0552.4