Pre_GI: BLASTP Hits

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Query: NC_006905:848000:858514 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 858514, End: 858753, Length: 240

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:793812:807068807068807310243Salmonella enterica subsp. enterica serovar Paratyphi C strainoxaloacetate decarboxylase subunit gamma1e-1995.1
NC_017046:819414:829109829109829354246Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxaloacetate decarboxylase subunit gamma4e-1683.2
NC_016863:819478:830210830210830455246Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1oxaloacetate decarboxylase subunit gamma4e-1683.2
NC_016857:819429:829124829124829369246Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74oxaloacetate decarboxylase subunit gamma4e-1683.2
NC_016856:819482:830210830210830455246Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Soxaloacetate decarboxylase subunit gamma4e-1683.2
NC_016810:819489:829124829124829369246Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit gamma4e-1683.2
NC_003197:815964:829868829868830113246Salmonella typhimurium LT2, complete genomeputative oxaloacetate decarboxylase subunit gamma4e-1683.2
NC_011294:781170:789021789021789269249Salmonella enterica subsp. enterica serovar Enteritidis stroxaloacetate decarboxylase subunit gamma3e-1477
NC_011274:793681:806915806915807154240Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91oxaloacetate decarboxylase subunit gamma7e-1475.9
NC_011080:819103:834260834260834466207Salmonella enterica subsp. enterica serovar Newport str. SL254,oxaloacetate decarboxylase gamma chain 23e-0960.5
NC_011083:862901:878146878146878352207Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxaloacetate decarboxylase gamma chain 39e-0958.9
NC_016860:857500:868737868737868943207Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit gamma1e-0858.9
NC_011149:779903:793582793582793791210Salmonella enterica subsp. enterica serovar Agona str. SL483,oxaloacetate decarboxylase gamma chain 31e-0858.5
NC_011205:839425:854090854090854299210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxaloacetate decarboxylase subunit gamma9e-0752.4
NC_010102:2287934:229408422940842294293210Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0652