Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4655773 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4655773, End: 4657860, Length: 2088

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:4733083473308347351762094Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein01335
NC_018080:5091772:5180480518048051823001821Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-44181
NC_007973:3065632:3078310307831030803402031Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein1e-42175
NC_014844:2721746:2741575274157527426721098Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-22108
NC_020272:3706722:3718728371872837207552028Bacillus amyloliquefaciens IT-45, complete genomechromosome segregation ATPase-like protein1e-22108
NC_015571:2044000:2086224208622420882572034Porphyromonas gingivalis TDC60, complete genomehypothetical protein1e-1482
NC_012914:336750:3445433445433465552013Paenibacillus sp. JDR-2, complete genomeChromosome segregation ATPase-like protein3e-1170.9
NC_010655:373437:3854863854863875012016Akkermansia muciniphila ATCC BAA-835, complete genomehypothetical protein9e-1169.3
NC_014844:2721746:274400027440002744590591Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-1068.2
NC_016633:1353458:1360591136059113625611971Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein2e-0758.2