Pre_GI: BLASTP Hits

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Query: NC_006905:3942753:3954105 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3954105, End: 3954662, Length: 558

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015387:1965711:198528519852851985815531Marinithermus hydrothermalis DSM 14884 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen5e-1787
NC_014831:1906691:192029719202971920908612Thermaerobacter marianensis DSM 12885 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0755.1
NC_015161:927152:942257942257942847591Deinococcus proteolyticus MRP chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen6e-1167
NC_013411:2951559:296061029606102961164555Geobacillus sp. Y412MC61, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0652.4
NC_011899:1926000:194284319428431943379537Halothermothrix orenii H 168, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen3e-0961.2
NC_014378:4428:158981589816425528Acetohalobium arabaticum DSM 5501 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen6e-0857
NC_014915:2092678:210054221005422101096555Geobacillus sp. Y412MC52 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0652.4
NC_014306:3524980:352442635244263524983558Erwinia billingiae Eb661, complete genomeCytochrome c biogenesis protein (Thiol:disulfide interchange protein)1e-62238
NC_011294:2334979:234252823425282343085558Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome c biogenesis protein CcmG3e-79294
NC_010694:1250841:127011112701111270668558Erwinia tasmaniensis, complete genomeCytochrome c biogenesis protein CcmG (Thiol:disulfide interchange protein DsbE)5e-61233
NC_007677:3469661:348035334803533480946594Salinibacter ruber DSM 13855, complete genomecytochrome c biogenesis protein, thiol:disulfide interchange protein9e-0959.7
NC_016810:4027170:403467440346744035231558Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-79295
NC_017046:2324554:234551323455132346070558Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-79295
NC_017046:4025998:403350240335024034059558Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-79295
NC_016810:2325190:234614923461492346706558Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-79295
NC_017075:2293209:231402823140282314555528Rubrivivax gelatinosus IL144, complete genomecytochrome c-type biogenesis protein CcmG2e-22105
NC_015186:2884866:288558128855812886144564Acidiphilium multivorum AIU301, complete genomecytochrome c-type biogenesis protein CcmG1e-1995.9
NC_016863:3967156:397466039746603975217558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1heme lyase disulfide oxidoreductase1e-79295
NC_016857:4025767:403467540346754035232558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74heme lyase disulfide oxidoreductase1e-79295
NC_016856:4019549:402705340270534027610558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sheme lyase disulfide oxidoreductase1e-79295
NC_016863:2324293:234817823481782348735558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1heme lyase disulfide oxidoreductase1e-79295
NC_016857:2325190:234614923461492346706558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74heme lyase disulfide oxidoreductase1e-79295
NC_003197:4005857:401336140133614013918558Salmonella typhimurium LT2, complete genomeheme lyase disulfide oxidoreductase1e-79295
NC_012125:1517925:153134015313401531897558Salmonella enterica subsp. enterica serovar Paratyphi C strainheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis2e-80298
NC_012125:3941974:394912239491223949679558Salmonella enterica subsp. enterica serovar Paratyphi C strainheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis2e-80298
NC_006905:2355290:236271723627172363274558Salmonella enterica subsp. enterica serovar Choleraesuis strheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis6e-81299
NC_016856:2379027:239998623999862400543558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sheme lyase/disulfide oxidoreductase1e-79295
NC_003197:2327474:234843323484332348990558Salmonella typhimurium LT2, complete genomeheme lyase/disulfide oxidoreductase1e-79295
NC_012731:2974745:298904029890402989594555Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeheme lyase/disulfide oxidoreductase3e-59227
NC_009648:2252757:227470722747072275261555Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeheme lyase/disulfide oxidoreductase (thiol:disulfide interchange protein)3e-59227
NC_016845:3024041:304466830446683045222555Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,heme lyase/disulfide oxidoreductase (thiol:disulfide interchange protein)6e-59226
NC_006511:3794017:380142438014243801981558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCheme lyase/disulfide oxidoreductase, cytochrome c-type biogenesis6e-79293
NC_010102:3955479:396224339622433962800558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-80296
NC_010067:3753971:376466037646603765217558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-77288
NC_010102:683444:696833696833697390558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-80296
NC_010067:632683:647263647263647820558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-75281
NC_015458:1938860:195296019529601953484525Pusillimonas sp. T7-7 chromosome, complete genomeperiplasmic protein thiol--disulfide oxidoreductase DsbE3e-24111
NC_009654:3849774:385458538545853855094510Marinomonas sp. MWYL1, complete genomeperiplasmic protein thiol--disulphide oxidoreductase DsbE4e-26117
NC_009092:179226:201257201257201814558Shewanella loihica PV-4, complete genomeperiplasmic protein thiol--disulphide oxidoreductase DsbE1e-30132
NC_008344:49039:581685816858692525Nitrosomonas eutropha C91, complete genomeperiplasmic protein thiol--disulphide oxidoreductase DsbE8e-24110
NC_015222:1492500:150186615018661502396531Nitrosomonas sp. AL212 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE3e-24111
NC_015497:1287877:130212413021241302696573Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE3e-23108
NC_015061:1251905:127868112786811279232552Rahnella sp. Y9602 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE1e-56219
NC_015731:1381737:139321913932191393749531Nitrosomonas sp. Is79A3 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE1e-23109
NC_015572:2541968:255852725585272559066540Methylomonas methanica MC09 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE2e-25115
NC_013421:2972269:297904629790462979603558Pectobacterium wasabiae WPP163, complete genomeperiplasmic protein thiol/disulphide oxidoreductase DsbE3e-61234
NC_016818:1291665:131197413119741312525552Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily1e-56218
NC_020541:2551539:255352125535212554063543Rhodanobacter sp. 2APBS1, complete genomeperiplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily2e-24112
NC_016943:1810417:181836918183691818953585Blastococcus saxobsidens DD2, complete genomeperiplasmic thioredoxin of cytochrome c-type biogenesis4e-1477.8
NC_016147:1825827:182778818277881828321534Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeprotein thiol/disulfide oxidoreductase DsbE1e-25115
NC_007799:284058:290760290760291257498Ehrlichia chaffeensis str. Arkansas, complete genomeputative thiol:disulfide oxidoreductase1e-1479.3
NC_017955:1611037:161840916184091618900492Modestobacter marinus, complete genomeRedoxin1e-0756.6
NC_018643:1309804:131451513145151315033519Alpha proteobacterium HIMB5 chromosome, complete genomeRedoxin4e-1580.9
NC_008344:1:116191161912452834Nitrosomonas eutropha C91, complete genomeRedoxin domain protein3e-0651.6
NC_010515:1124298:114531611453161146125810Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRedoxin domain protein9e-0650.1
NC_014315:1169910:117141611714161171934519Nitrosococcus watsoni C-113 chromosome, complete genomeredoxin domain-containing protein2e-0858.5
NC_015957:527777:544211544211544828618Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRedoxin domain-containing protein1e-0652.4
NC_015671:255808:278976278976279527552Cellvibrio gilvus ATCC 13127 chromosome, complete genomeRedoxin domain-containing protein2e-0755.8
NC_020829:5382500:538462253846225385425804Pseudomonas denitrificans ATCC 13867, complete genomeredoxin domain-containing protein5e-0753.9
NC_015458:1938860:195100219510021951505504Pusillimonas sp. T7-7 chromosome, complete genomeredoxin domain-containing protein4e-0754.3
NC_014960:2059012:207891320789132079449537Anaerolinea thermophila UNI-1, complete genomethiol-disulfide oxidoreductase1e-0963.2
NC_011274:3799696:381031438103143810871558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein3e-79294
NC_011147:682897:696312696312696869558Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein6e-79293
NC_003198:3824187:383480738348073835364558Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein9e-79292
NC_015761:2227500:223118322311832231740558Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein2e-75281
NC_003198:2297837:230538423053842305941558Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein9e-79292
NC_015761:3698520:370556937055693706126558Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein2e-75281
NC_020300:131782:131196131196131801606Bartonella australis Aust/NH1, complete genomethiol:disulfide interchange protein4e-1890.9
NC_011294:3880500:388801738880173888574558Salmonella enterica subsp. enterica serovar Enteritidis strthiol:disulfide interchange protein3e-79294
NC_006511:682863:696278696278696835558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCthiol:disulfide interchange protein6e-79293
NC_004631:3809678:382029738202973820854558Salmonella enterica subsp. enterica serovar Typhi Ty2, completethiol:disulfide interchange protein9e-79292
NC_011274:2325840:233339723333972333954558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein3e-79294
NC_011147:3789696:379710337971033797660558Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein6e-79293
NC_004631:685357:698772698772699329558Salmonella enterica subsp. enterica serovar Typhi Ty2, completethiol:disulfide interchange protein9e-79292
NC_016831:687549:700599700599701156558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein (cytochrome c biogenesis protein ccmg)3e-79294
NC_016831:3779611:379123137912313791788558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein (cytochrome c biogenesis protein ccmg)3e-79294
NC_006510:2110430:211863121186312119170540Geobacillus kaustophilus HTA426, complete genomethiol:disulfide interchange protein (thioredoxin)2e-0652
NC_011083:2375061:239601323960132396570558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thiol:disulfide interChange protein DsbE1e-79295
NC_011149:2294500:229991622999162300473558Salmonella enterica subsp. enterica serovar Agona str. SL483,thiol:disulfide interChange protein DsbE8e-79292
NC_011094:2348491:235421123542112354768558Salmonella enterica subsp. enterica serovar Schwarzengrund strthiol:disulfide interChange protein DsbE9e-79292
NC_011283:2323687:232703923270392327593555Klebsiella pneumoniae 342 chromosome, complete genomethiol:disulfide interchange protein DsbE4e-59227
NC_016860:2323017:234397623439762344533558Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbE1e-79295
NC_011080:3976441:398394439839443984501558Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interChange protein DsbE2e-79294
NC_011205:2462025:246957424695742470131558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interChange protein DsbE3e-79294
NC_011094:3887648:389515138951513895708558Salmonella enterica subsp. enterica serovar Schwarzengrund strthiol:disulfide interChange protein DsbE9e-79292
NC_016860:4110968:411847241184724119029558Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbE1e-79295
NC_011083:4020000:402756840275684028125558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thiol:disulfide interChange protein DsbE1e-79295
NC_011080:2342672:235020523502052350762558Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interChange protein DsbE2e-79294
NC_011205:4038884:404638640463864046943558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interChange protein DsbE3e-79294
NC_016832:3798475:380909438090943809651558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Thiol:disulfide interchange protein dsbE9e-79292
NC_014623:4426416:444690744469074447461555Stigmatella aurantiaca DW4/3-1 chromosome, complete genomethiol:disulfide interchange protein dsbe1e-1479.3
NC_020126:6019850:602186860218686022428561Myxococcus stipitatus DSM 14675, complete genomethiol:disulfide interchange protein DsbE1e-1272.8
NC_016832:687000:698726698726699283558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Thiol:disulfide interchange protein dsbE9e-79292
NC_011149:3930358:393785339378533938410558Salmonella enterica subsp. enterica serovar Agona str. SL483,thiol:disulfide interChange protein DsbE2e-78291
NC_015224:3291736:329345932934593294025567Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,thiol:disulfide interchange protein DsbE3e-60230
NC_004578:4061372:409004840900484090584537Pseudomonas syringae pv. tomato str. DC3000, complete genomethiol:disulfide interchange protein DsbE4e-31134
NC_010170:3944228:398406739840673984594528Bordetella petrii, complete genomethiol:disulfide interchange protein DsbE7e-2096.7
NC_008095:3785848:380578138057813806332552Myxococcus xanthus DK 1622, complete genomethiol:disulfide interchange protein DsbE9e-1476.6
NC_009659:1050532:106420110642011064737537Janthinobacterium sp. Marseille chromosome, complete genomeThiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG)8e-37153
NC_020126:2687627:268848226884822689039558Myxococcus stipitatus DSM 14675, complete genomethioredoxin family protein2e-0858.9
NC_017030:2299592:232353423235342324118585Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin family protein8e-0753.5