Pre_GI: BLASTP Hits

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Query: NC_006905:3942753:3942753 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3942753, End: 3944090, Length: 1338

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3798475:3818580381858038199171338Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DsdX permease0763
NC_003198:3824187:3844293384429338456301338Salmonella enterica subsp. enterica serovar Typhi str. CT18,DsdX permease0763
NC_004631:3809678:3829783382978338311201338Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDsdX permease0763
NC_016831:3779611:3800627380062738019641338Salmonella enterica subsp. enterica serovar Gallinarum/pullorumDsdX permease0763
NC_011274:3799696:3819796381979638211331338Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91permease DsdX0763
CP002797:2472908:2480464248046424818011338Escherichia coli NA114, complete genomeD-serine permease0726
NC_007946:2625461:2639115263911526404521338Escherichia coli UTI89, complete genomehypothetical protein0726
NC_008563:2610499:2611652261165226129891338Escherichia coli APEC O1, complete genomeDsdX permease0726
NC_011750:2585015:2599649259964926009861338Escherichia coli IAI39 chromosome, complete genomepermease DsdX0726
NC_011742:2533500:2534747253474725360841338Escherichia coli S88 chromosome, complete genomepermease DsdX0726
NC_010498:2555706:2568667256866725700041338Escherichia coli SMS-3-5, complete genomegluconate:H+ symporter (GntP) family protein0726
NC_011745:2751437:2752590275259027539271338Escherichia coli ED1a chromosome, complete genomepermease DsdX0726
NC_011750:4390000:4391185439118543925221338Escherichia coli IAI39 chromosome, complete genomepermease DsdX0724
NC_004431:2747237:2760235276023527615721338Escherichia coli CFT073, complete genomeDsdX permease0724
AC_000091:2462461:2483293248329324846301338Escherichia coli W3110 DNA, complete genomepredicted transporter0721
NC_009800:2505872:2509252250925225105891338Escherichia coli HS, complete genometransporter, gluconate:H+ symporter (GntP) family0721
NC_010473:2548946:2567634256763425689711338Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transporter0721
NC_000913:2455037:2475869247586924772061338Escherichia coli K12, complete genomepredicted transporter0721
NC_012759:2342986:2361674236167423630111338Escherichia coli BW2952 chromosome, complete genomepermease DsdX0721
NC_012967:2409500:2412074241207424134111338Escherichia coli B str. REL606 chromosome, complete genomepermease DsdX0721
NC_009901:4216206:4217550421755042188871338Shewanella pealeana ATCC 700345, complete genomegluconate transporter5e-169594
NC_012912:242709:2603992603992617151317Dickeya zeae Ech1591, complete genomegluconate transporter2e-61236
NC_016023:1874827:1884996188499618863421347Bacillus coagulans 36D1 chromosome, complete genomegluconate transporter2e-59230
NC_016027:1357659:1400153140015314014961344Gluconacetobacter xylinus NBRC 3288, complete genomegluconate permease2e-59230
NC_009487:2656420:2674255267425526756131359Staphylococcus aureus subsp. aureus JH9 chromosome, completegluconate transporter4e-59229
NC_009632:2656296:2674131267413126754891359Staphylococcus aureus subsp. aureus JH1 chromosome, completegluconate transporter4e-59229
NC_016928:2517691:2540118254011825414761359Staphylococcus aureus subsp. aureus M013 chromosome, completegluconate permease, Bsu4004-like protein3e-59229
NC_002952:2653482:2664202266420226655601359Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative gluconate permease7e-59228
NC_017342:751496:7582557582557596131359Staphylococcus aureus subsp. aureus TCH60 chromosome, completegluconate:H+ symporter family transporter GntP7e-59228
NC_017338:2558825:2576706257670625780641359Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeGntP family gluconate:proton (H+) symporter7e-59228
NC_017351:2594171:2611792261179226131501359Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehigh-affinity gluconate transporter7e-59228
NC_017337:2588331:2599424259942426007821359Staphylococcus aureus subsp. aureus ED133 chromosome, completegluconate permease5e-59228
NC_002951:2554511:2572964257296425743221359Staphylococcus aureus subsp. aureus COL, complete genomegluconate transporter, permease protein5e-59228
NC_007795:2561928:2584907258490725862651359Staphylococcus aureus subsp. aureus NCTC 8325, complete genomegluconate permease, putative5e-59228
NC_002745:2553138:2575474257547425768321359Staphylococcus aureus subsp. aureus N315, complete genomegluconate permease5e-59228
NC_003923:2561953:2584171258417125855291359Staphylococcus aureus subsp. aureus MW2, complete genomegluconate permease5e-59228
NC_002758:2628000:2645900264590026472581359Staphylococcus aureus subsp. aureus Mu50, complete genomegluconate permease5e-59228
NC_017347:2616000:2631270263127026326281359Staphylococcus aureus subsp. aureus T0131 chromosome, completeGluconate permease5e-59228
NC_017343:2474743:2495553249555324969111359Staphylococcus aureus subsp. aureus ECT-R 2, complete genomegluconate permease5e-59228
NC_017341:2648631:2666532266653226678901359Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,GntP family gluconate:proton (H+) symporter5e-59228
NC_016912:2433500:2456118245611824574761359Staphylococcus aureus subsp. aureus VC40 chromosome, completegluconate transporter, permease protein5e-59228
NC_013450:2572530:2590340259034025916981359Staphylococcus aureus subsp. aureus ED98, complete genomegluconate transporter, permease protein5e-59228
NC_009641:2619759:2642311264231126436691359Staphylococcus aureus subsp. aureus str. Newman chromosome,gluconate permease5e-59228
NC_010079:2618345:2636416263641626377741359Staphylococcus aureus subsp. aureus USA300_TCH1516, completeGntP family gluconate:proton (H+) symporter5e-59228
NC_007622:2501562:2511931251193125132891359Staphylococcus aureus RF122, complete genomegluconate permease2e-58226
NC_012472:4630485:4632872463287246341971326Bacillus cereus 03BB102, complete genomegluconate permease7e-58224
NC_008600:4626464:4628854462885446301791326Bacillus thuringiensis str. Al Hakam, complete genomegluconate permease1e-57224
NC_016641:4727000:4729601472960147309471347Paenibacillus terrae HPL-003 chromosome, complete genomegluconate permease3e-57223
NC_017200:4632000:4637153463715346384781326Bacillus thuringiensis serovar finitimus YBT-020 chromosome,gluconate permease5e-57222
NC_012581:1075663:1086709108670910880341326Bacillus anthracis str. CDC 684 chromosome, complete genomegluconate permease1e-56221
NC_011772:4763542:4766676476667647680011326Bacillus cereus G9842, complete genomegluconate permease1e-56221
NC_016941:2498299:2521380252138025227381359Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative gluconate permease5e-56218
NC_008563:4905186:4907858490785849091771320Escherichia coli APEC O1, complete genomeL-idonate and D-gluconate transporter3e-55216
NC_012967:4473368:4474433447443344757521320Escherichia coli B str. REL606 chromosome, complete genomeL-idonate and D-gluconate transporter6e-55215
NC_012691:241404:2532102532102545291320Tolumonas auensis DSM 9187, complete genomegluconate transporter6e-55215
NC_011205:4718239:4718239471823947196301392Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gluconate:H+ symporter family protein6e-54212
NC_011080:4703266:4704328470432847057191392Salmonella enterica subsp. enterica serovar Newport str. SL254,transporter, gluconate:H+ symporter (GntP) family6e-54212
NC_006905:4638707:4639769463976946412021434Salmonella enterica subsp. enterica serovar Choleraesuis strGntP family, L-idonate transport protein6e-54211
NC_012125:4716000:4717083471708347184021320Salmonella enterica subsp. enterica serovar Paratyphi C strainGntP family, L-idonate transport protein7e-54211
NC_012483:30784:4424944249456131365Acidobacterium capsulatum ATCC 51196, complete genometransporter, gluconate:H+ symporter (GntP) family7e-53208
NC_015703:4531578:4535212453521245365281317Runella slithyformis DSM 19594 chromosome, complete genomegluconate transporter2e-51203
NC_011294:4560902:4560902456090245621221221Salmonella enterica subsp. enterica serovar Enteritidis strgnt-II system l-idonate transporter7e-51201
NC_011274:4538722:4538722453872245399421221Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GNT-II system l-idonate transporter7e-51201
NC_004431:5123325:5144682514468251460251344Escherichia coli CFT073, complete genomeHigh-affinity gluconate transporter2e-49197
NC_011750:4978000:4997413499741349987561344Escherichia coli IAI39 chromosome, complete genomefructuronate transporter2e-49197
CP002516:4199133:4199133419913342004761344Escherichia coli KO11, complete genomegluconate transporter2e-49196
AC_000091:4534935:4554633455463345559761344Escherichia coli W3110 DNA, complete genomefructuronate transporter2e-49196
NC_009801:4882684:4906902490690249082451344Escherichia coli E24377A, complete genomehigh-affinity gluconate transporter GntP2e-49196
NC_010498:4930649:4954576495457649559191344Escherichia coli SMS-3-5, complete genomehigh-affinity gluconate transporter GntP2e-49196
CP002185:4791811:4812394481239448137371344Escherichia coli W, complete genomefructuronate transporter2e-49196
CU928160:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter2e-49196
NC_000913:4528278:4547976454797645493191344Escherichia coli K12, complete genomefructuronate transporter2e-49196
CP002797:4656327:4677849467784946791921344Escherichia coli NA114, complete genomeFructuronate transporter2e-49196
NC_011353:5455224:5478423547842354797661344Escherichia coli O157:H7 str. EC4115 chromosome, complete genomefructuronate transporter2e-49196
NC_011741:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter2e-49196
NC_011742:4873351:4892706489270648940491344Escherichia coli S88 chromosome, complete genomefructuronate transporter2e-49196
NC_012967:4510393:4530867453086745322101344Escherichia coli B str. REL606 chromosome, complete genomefructuronate transporter2e-49196
NC_013008:5411285:5434484543448454358271344Escherichia coli O157:H7 str. TW14359 chromosome, complete genomefructuronate transporter2e-49196
NC_013941:5219841:5243056524305652443991344Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHigh-affinity gluconate transporter2e-49196
NC_016902:4199133:4199133419913342004761344Escherichia coli KO11FL chromosome, complete genomegluconate transporter2e-49196
NC_004741:4364235:4364235436423543655781344Shigella flexneri 2a str. 2457T, complete genomegluconate transport system permease 32e-49196
NC_002695:5381576:5404775540477554061181344Escherichia coli O157:H7 str. Sakai, complete genomegluconate transport system permease 32e-49196
NC_016822:4889656:4911895491189549132381344Shigella sonnei 53G, complete genomefructuronate transporter6e-49195
NC_010610:1178430:1219921121992112212671347Lactobacillus fermentum IFO 3956, complete genomegluconate transport protein2e-47190
NC_014210:4831858:4832956483295648343891434Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,gluconate transporter6e-47188
NC_020210:3341976:3367120336712033684901371Geobacillus sp. GHH01, complete genomegluconate transporter2e-45183
NC_012214:3750649:3775990377599037773301341Erwinia pyrifoliae Ep1/96, complete genomeLow-affinity gluconate transporter1e-44181
NC_009512:755658:7707397707397721241386Pseudomonas putida F1, complete genomegluconate transporter2e-43177
NC_017986:3407913:3430736343073634321211386Pseudomonas putida ND6 chromosome, complete genomegluconate transporter3e-43176
NC_013093:6511108:6511108651110865125021395Actinosynnema mirum DSM 43827, complete genomegluconate transporter3e-43176
NC_002947:737924:7601527601527615371386Pseudomonas putida KT2440, complete genomegluconate transporter5e-43175
NC_007492:3180480:3221373322137332227581386Pseudomonas fluorescens PfO-1, complete genomeGluconate transporter1e-42174
NC_003198:4676536:4681892468189246833821491Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-42173
NC_004631:4661000:4664781466478146662711491Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-42173
NC_016832:4649432:4652861465286146543511491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Gnt-II system L-idonate transporter3e-42173
NC_013416:16493:2268922689240411353Aggregatibacter actinomycetemcomitans D11S-1, complete genomeGntT protein2e-42173
NC_016513:317197:3250073250073263591353Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeGntT protein2e-42173
NC_010003:570643:5872715872715886141344Petrotoga mobilis SJ95, complete genomegluconate transporter1e-41171
NC_020063:3690308:3723033372303337243641332Enterobacteriaceae bacterium strain FGI 57, complete genomeD-fructuronate permease1e-41171
NC_019978:1022209:1022209102220910235401332Halobacteroides halobius DSM 5150, complete genomegluconate transporter6e-41168
NC_011283:2836000:2857599285759928589631365Klebsiella pneumoniae 342 chromosome, complete genomepermease1e-40167
NC_011283:2836000:2840671284067128420351365Klebsiella pneumoniae 342 chromosome, complete genomepermease1e-40167
NC_013850:2846069:2847534284753428488981365Klebsiella variicola At-22 chromosome, complete genomegluconate transporter1e-40167
NC_020064:521500:5235865235865249711386Serratia marcescens FGI94, complete genomegluconate transporter5e-39162
NC_016582:1018014:1018014101801410194411428Streptomyces bingchenggensis BCW-1 chromosome, complete genomegluconate transporter4e-36152
NC_016810:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium strpermease5e-35149
NC_016856:3026426:3075786307578630772821497Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease5e-35149
NC_016857:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GntP protein5e-35149
NC_016863:2974333:3024038302403830255341497Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease5e-35149
NC_017046:3027161:3076865307686530783611497Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease5e-35149
NC_003197:3005842:3055549305554930570451497Salmonella typhimurium LT2, complete genomeputative permease5e-35149
NC_016860:3029272:3078979307897930804751497Salmonella enterica subsp. enterica serovar Typhimurium strputative permease5e-35149
NC_004631:2872192:2891874289187428933701497Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible permease8e-35148
NC_011080:2982346:3033797303379730352931497Salmonella enterica subsp. enterica serovar Newport str. SL254,GntP8e-35148
NC_011149:2912219:2965705296570529672011497Salmonella enterica subsp. enterica serovar Agona str. SL483,GntP8e-35148
NC_010102:2967464:3020267302026730217631497Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-35148
NC_011094:2913500:2960886296088629623821497Salmonella enterica subsp. enterica serovar Schwarzengrund strGntP protein8e-35148
NC_011294:2919906:2940308294030829418041497Salmonella enterica subsp. enterica serovar Enteritidis strpermease8e-35148
NC_012125:2938519:2989554298955429910501497Salmonella enterica subsp. enterica serovar Paratyphi C strainpermease8e-35148
NC_016832:2859491:2879171287917128806671497Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative permease8e-35148
NC_011147:2814664:2864093286409328655891497Salmonella enterica subsp. enterica serovar Paratyphi A strpermease1e-34147
NC_006511:2819128:2868557286855728700531497Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible permease1e-34147
NC_009922:2721343:2746677274667727480531377Alkaliphilus oremlandii OhILAs, complete genomegluconate transporter1e-34147
NC_008593:640000:6538316538316552011371Clostridium novyi NT, complete genomegluconate permease9e-34144
NC_016831:2867766:2917572291757229190681497Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative permease1e-31138
NC_010407:3174470:3187392318739231887921401Clavibacter michiganensis subsp. sepedonicus chromosome, completegluconate permease1e-31137
NC_016801:170876:1976321976321990201389Corynebacterium diphtheriae C7 (beta) chromosome, complete genomegluconate permease1e-30134
NC_016790:134951:1592071592071605951389Corynebacterium diphtheriae VA01 chromosome, complete genomegluconate permease4e-30132
NC_008309:385592:3877233877233890571335Haemophilus somnus 129PT, complete genomegluconate permease6e-30132
NC_010519:796229:7962297962297975781350Haemophilus somnus 2336 chromosome, complete genomegluconate transporter1e-29131
NC_009801:3013838:3040983304098330423471365Escherichia coli E24377A, complete genometransporter, gluconate:H+ symporter (GntP) family8e-28125
NC_004337:2478461:248202924820292482247219Shigella flexneri 2a str. 301, complete genomesimilar to high-affinity transport permease for gluconate2e-26120
NC_007384:2587876:259213425921342592352219Shigella sonnei Ss046, complete genomeD-serine permease6e-26119
NC_011748:2708500:271134727113472711565219Escherichia coli 55989, complete genome6e-26119
NC_004741:2456297:246016824601682460386219Shigella flexneri 2a str. 2457T, complete genome6e-26119
AP010958:2911741:292996329299632930181219Escherichia coli O103:H2 str. 12009 DNA, complete genome6e-26119
NC_007606:2353098:235577723557772355995219Shigella dysenteriae Sd197, complete genomeD-serine permease6e-26119
CU928160:2513000:251583625158362516054219Escherichia coli IAI1 chromosome, complete genomefragment of putative transporter (partial)6e-26119
CP002185:2659628:266342526634252663643219Escherichia coli W, complete genome6e-26119
CU928145:2708500:271134727113472711565219Escherichia coli 55989 chromosome, complete genomefragment of putative transporter (partial)6e-26119
NC_009801:2639787:264247526424752642693219Escherichia coli E24377A, complete genomehypothetical protein6e-26119
NC_011353:3276734:331121933112193311437219Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-26119
NC_017328:2516000:251967125196712519889219Shigella flexneri 2002017 chromosome, complete genomeDsdX permease6e-26119
NC_016822:2678691:268294926829492683167219Shigella sonnei 53G, complete genomepermease DsdX6e-26119
NC_013941:2928000:294816929481692948387219Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-26119
NC_013361:3313284:333712833371283337346219Escherichia coli O26:H11 str. 11368 chromosome, complete genome6e-26119
NC_013353:2911741:292996329299632930181219Escherichia coli O103:H2 str. 12009, complete genome6e-26119
NC_011741:2513000:251583625158362516054219Escherichia coli IAI1 chromosome, complete genome6e-26119
NC_011601:2614691:263538426353842635602219Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome6e-26119
NC_011415:2732000:274707427470742747292219Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-26119
NC_008253:2499735:250240125024012502619219Escherichia coli 536, complete genometruncated DsdX permease8e-26118
NC_013008:3231414:326609032660903266305216Escherichia coli O157:H7 str. TW14359 chromosome, complete genome2e-25117
NC_008258:2473000:247576824757682475986219Shigella flexneri 5 str. 8401, complete genomeD-serine permease2e-25117
NC_002655:3260500:327706232770623277280219Escherichia coli O157:H7 EDL933, complete genomeD-serine permease7e-25115
NC_011751:2768864:277155227715522771770219Escherichia coli UMN026 chromosome, complete genome4e-25115
NC_010545:2025000:2025091202509120264911401Corynebacterium urealyticum DSM 7109, complete genomegluconate permease9e-24111
NC_012225:512429:5382855382855395651281Brachyspira hyodysenteriae WA1, complete genomegluconate transporter9e-24111
NC_013521:2924540:2924540292454029259071368Sanguibacter keddieii DSM 10542, complete genomeH+/gluconate symporter family protein1e-23111
NC_017243:1614157:1640134164013416414231290Brachyspira intermedia PWS/A chromosome, complete genomegluconate transporter5e-2099.4
NC_016077:388941:3970783970783984631386Acidaminococcus intestini RyC-MR95 chromosome, complete genomegluconate transporter1e-1894.7
NC_014253:431942:4339964339964352821287Methanohalobium evestigatum Z-7303 chromosome, complete genomegluconate transporter1e-1481.3
NC_003901:1568000:1588402158840215897391338Methanosarcina mazei Go1, complete genomegluconate permease3e-1067
NC_020389:1346358:1362821136282113641581338Methanosarcina mazei Tuc01, complete genomePermease4e-1066.2
NC_020302:146807:1672461672461685981353Corynebacterium halotolerans YIM 70093 = DSM 44683, completegluconate permease1e-0861.6
NC_018581:3646489:3660440366044036618611422Gordonia sp. KTR9 chromosome, complete genomeH+/gluconate symporter-related permease1e-0758.5