Pre_GI: BLASTP Hits

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Query: NC_006905:3717306:3728555 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3728555, End: 3729598, Length: 1044

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:839734:8456508456508466931044Raoultella ornithinolytica B6, complete genomeL-asparaginase1e-149529
NC_016612:3843358:3864370386437038654131044Klebsiella oxytoca KCTC 1686 chromosome, complete genometype II L-asparaginase4e-149527
NC_013850:3303500:3322603332260333236461044Klebsiella variicola At-22 chromosome, complete genomeL-asparaginase, type II2e-146518
NC_009802:1977596:1977596197759619786301035Campylobacter concisus 13826, complete genomeputative phage integrase3e-72272
NC_015846:24771:4069640696417211026Capnocytophaga canimorsus Cc5 chromosome, complete genomeL-asparagine amidohydrolase3e-70265
NC_012039:53497:6747267472685181047Campylobacter lari RM2100, complete genomeL-asparaginase3e-69262
NC_008787:31999:3752237522385681047Campylobacter jejuni subsp. jejuni 81-176, complete genomeL-asparaginase3e-69262
NC_009707:36024:3768137681387271047Campylobacter jejuni subsp. doylei 269.97 chromosome, completeL-asparaginase6e-69261
NC_017280:30388:3591135911369571047Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeL-asparaginase1e-68260
NC_009839:30409:359823598236977996Campylobacter jejuni subsp. jejuni 81116, complete genomeL-asparaginase9e-69260
NC_020126:5470090:5471273547127354724151143Myxococcus stipitatus DSM 14675, complete genomeL-asparaginase5e-64244
NC_009714:1576401:1576401157640115774471047Campylobacter hominis ATCC BAA-381, complete genomeL-asparaginase II3e-63242
NC_010498:1117938:1135375113537511364211047Escherichia coli SMS-3-5, complete genomeL-asparaginase 21e-62240
NC_017281:30261:357943579436789996Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeL-asparaginase1e-61237
NC_017279:29737:376783767838673996Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeL-asparaginase1e-61237
NC_003912:30265:357983579836793996Campylobacter jejuni RM1221, complete genomeL-asparaginase1e-61237
NC_014802:27857:357973579736792996Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeL-asparaginase1e-61236
NC_002163:29726:376673766738662996Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomecytoplasmic L-asparaginase2e-61236
NC_015674:1114915:113101711310171132003987Helicobacter bizzozeronii CIII-1, complete genomeL-asparaginase1e-57224
NC_015690:1109335:1155294115529411564541161Paenibacillus mucilaginosus KNP414 chromosome, complete genomeL-asparaginase, type II1e-56220
NC_016935:1636278:1722994172299417241541161Paenibacillus mucilaginosus 3016 chromosome, complete genometype II L-asparaginase1e-56220
NC_014640:6971000:6971929697192969729331005Achromobacter xylosoxidans A8 chromosome, complete genomeL-asparaginase 25e-56218
NC_015379:908904:961326961326962195870Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative glutamin-(asparagin-)ase2e-55216
NC_013209:1663704:1669147166914716702471101Acetobacter pasteurianus IFO 3283-01, complete genomeL-asparaginase II2e-54213
NC_017108:1663698:1669141166914116702411101Acetobacter pasteurianus IFO 3283-12, complete genomeL-asparaginase II2e-54213
NC_017111:1663698:1669141166914116702411101Acetobacter pasteurianus IFO 3283-32, complete genomeL-asparaginase II2e-54213
NC_017121:1663698:1669141166914116702411101Acetobacter pasteurianus IFO 3283-07, complete genomeL-asparaginase II2e-54213
NC_017150:1571450:1576893157689315779931101Acetobacter pasteurianus IFO 3283-01-42C, complete genomeL-asparaginase II2e-54213
NC_002927:5327094:5110511061111002Bordetella bronchiseptica RB50, complete genomeL-asparaginase II precursor4e-52205
NC_010645:3720501:4346434653531008Bordetella avium 197N, complete genomeL-asparaginase II2e-50199
NC_015975:380500:3995873995874006091023Lactobacillus ruminis ATCC 27782 chromosome, complete genomeasparaginase3e-46186
NC_007973:2150962:2154051215405121550521002Ralstonia metallidurans CH34 chromosome 1, complete sequenceL-asparaginases, type II2e-43176
NC_006351:2759708:2793880279388027949351056Burkholderia pseudomallei K96243 chromosome 2, complete sequenceL-asparaginase2e-43176
NC_008319:2335801:2334785233478523358041020Synechococcus sp. CC9311, complete genomeL-asparaginase1e-33144
NC_015275:2712991:271746427174642718459996Clostridium lentocellum DSM 5427 chromosome, complete genomeAsparaginase2e-32139
NC_015875:1926981:194433919443391945301963Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeL-asparaginase6e-30131
NC_009009:540992:546421546421547383963Streptococcus sanguinis SK36, complete genomeL-asparaginase, putative4e-29129
NC_015726:1813961:1816152181615218172011050Cupriavidus necator N-1 chromosome 1, complete sequenceL-asparaginase AnsB6e-29128
NC_016047:2631511:263867026386702639644975Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeL-asparaginase1e-25117
NC_006322:2658587:266844726684472669256810Bacillus licheniformis ATCC 14580, complete genomeYccC11e-25117
NC_015565:530000:534844534844535824981Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeasparaginase2e-23110
NC_010501:1286971:130616513061651307154990Pseudomonas putida W619, complete genomeAsparaginase/glutaminase4e-21102
NC_012526:157000:174797174797175762966Deinococcus deserti VCD115, complete genomeputative L-asparaginase, (L-asparagine amidohydrolase), (L- ASNase)6e-2098.6
NC_015161:199666:200690200690201682993Deinococcus proteolyticus MRP chromosome, complete genomeAsparaginase1e-1997.8
NC_007955:1108000:1109590110959011108371248Methanococcoides burtonii DSM 6242, complete genomeGlutamyl-tRNA(Gln) amidotransferase, subunit E4e-1582.8
NC_008268:4669530:468898046889804689942963Rhodococcus sp. RHA1, complete genomeasparaginase3e-1376.6
NC_009342:2211000:222942322294232230400978Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-1376.3
NC_003450:2244862:226542122654212266398978Corynebacterium glutamicum ATCC 13032, complete genomeL-asparaginase3e-1376.3
NC_006958:2214893:223545322354532236430978Corynebacterium glutamicum ATCC 13032, complete genomeL-ASPARAGINASE3e-1376.3
NC_018750:1835500:184387418438741844860987Streptomyces venezuelae ATCC 10712, complete genomeL-asparaginase4e-1375.9
NC_015320:211147:2312392312392324891251Archaeoglobus veneficus SNP6 chromosome, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D9e-1374.7
NC_012522:4692260:470843947084394709401963Rhodococcus opacus B4, complete genomeputative L-asparaginase2e-1273.6
NC_013926:1166454:1171046117104611722811236Aciduliprofundum boonei T469 chromosome, complete genomeL-asparaginase, type I3e-1273.2
NC_008698:310069:3304793304793318341356Thermofilum pendens Hrk 5, complete genomeglutamyl-tRNA(Gln) amidotransferase, subunit D4e-1272.8
NC_000868:643548:6538126538126551281317Pyrococcus abyssi GE5, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D6e-1272
NC_000961:1303446:1309541130954113108571317Pyrococcus horikoshii OT3, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D2e-1170.1
NC_016822:1431200:1486657148665714876731017Shigella sonnei 53G, complete genomeasparaginase2e-1067
NC_012780:284336:304601304601305575975Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequenceL-asparaginase3e-1066.6
NC_009515:307800:3156693156693169791311Methanobrevibacter smithii ATCC 35061, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D3e-1066.2
NC_017047:2260118:2291201229120122922141014Rahnella aquatilis HX2 chromosome, complete genomeasparaginase4e-1065.9
NC_012622:1194347:1193017119301711943541338Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D1e-0964.3
NC_014121:2514544:2514544251454425155601017Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecytoplasmic asparaginase I3e-0963.2
NC_016602:2586044:2588028258802825890411014Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceL-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D4e-0962.4
NC_014507:2276000:2298890229889023001341245Methanoplanus petrolearius DSM 11571 chromosome, complete genomeglutamyl-tRNA(Gln) amidotransferase subunit D8e-0961.6
NC_013204:929434:9546879546879556941008Eggerthella lenta DSM 2243, complete genomeL-asparaginase, type I2e-0860.1
NC_013421:2453078:2453078245307824541601083Pectobacterium wasabiae WPP163, complete genomeL-asparaginase, type I3e-0859.7
NC_006624:1448165:145117314511731452159987Thermococcus kodakarensis KOD1, complete genomeL-asparaginase5e-0858.9
NC_004088:2366000:2389132238913223901481017Yersinia pestis KIM, complete genomecytoplasmic asparaginase I2e-0757
NC_015311:2826000:2847417284741728484571041Prevotella denticola F0289 chromosome, complete genomeL-asparaginase3e-0756.6
NC_008570:3777469:3789179378917937901861008Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeL-asparaginase I4e-0755.8
NC_012997:1335902:1339160133916013401821023Teredinibacter turnerae T7901, complete genomeL-asparaginase 18e-0755.1
NC_008529:264000:2647432647432657501008Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeL-asparaginase2e-0653.9