Pre_GI: BLASTP Hits

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Query: NC_006905:368942:384386 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 384386, End: 385234, Length: 849

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:593100:611187611187612047861Salmonella enterica subsp. enterica serovar Schwarzengrund strgp594e-106384
NC_007946:1239278:125173912517391252638900Escherichia coli UTI89, complete genomeputative replication protein O of bacteriophage1e-67256
NC_008563:1175035:118912611891261190025900Escherichia coli APEC O1, complete genomeputative replication protein O of bacteriophage1e-67256
NC_004431:1401681:141389114138911414790900Escherichia coli CFT073, complete genomePutative replication protein O of bacteriophage1e-67256
NC_011751:1405381:142064614206461421545900Escherichia coli UMN026 chromosome, complete genomereplication protein from bacteriophage origin1e-67256
NC_011601:1039500:105322710532271054126900Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein1e-67256
NC_012759:4132527:414428741442874145186900Escherichia coli BW2952 chromosome, complete genomeReplication protein O1e-67256
NC_012947:3015985:302002130200213020920900Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage replication protein O1e-67256
NC_013941:975353:990688990688991587900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-67256
NC_011601:717072:732229732229733005777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein6e-67254
NC_013361:3112023:312820231282023129140939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein6e-65247
AP010958:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009 DNA, complete genomereplication protein1e-64246
NC_002655:1332961:134438413443841345322939Escherichia coli O157:H7 EDL933, complete genomeputative replication protein O of bacteriophage BP-933W1e-64246
NC_013353:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009, complete genomereplication protein1e-64246
NC_013361:1558423:157197515719751572913939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein1e-64246
NC_013364:1183000:119564111956411196579939Escherichia coli O111:H- str. 11128, complete genomeputative replication protein1e-64246
NC_011353:3276734:328012532801253281063939Escherichia coli O157:H7 str. EC4115 chromosome, complete genomereplication protein O9e-65246
NC_013008:3231414:323499632349963235934939Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O9e-65246
NC_013941:3300000:330100833010083301946939Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O7e-64244
NC_002655:301940:303399303399304007609Escherichia coli O157:H7 EDL933, complete genomepartial O replication protein for prophage CP-933H5e-62237
NC_011742:1177946:119271511927151193179465Escherichia coli S88 chromosome, complete genome2e-54212
NC_013361:3287671:329336032933603294181822Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein2e-28126
NC_016860:364981:380860380860381681822Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage replication protein O4e-28125
NC_020418:3133831:313626531362653137101837Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-27121
NC_014837:2354241:2355619235561923566831065Pantoea sp. At-9b chromosome, complete genomephage replication protein O1e-26120
NC_013282:1200993:121593612159361216832897Cronobacter turicensis, complete genomeDNA replication protein gp184e-25115
NC_011083:374000:387358387358388173816Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA replication protein gp182e-23109
NC_011205:609464:629058629058629891834Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA replication protein gp182e-23109
NC_016816:1970189:1987156198715619882201065Pantoea ananatis LMG 5342, complete genomephage replication protein O2e-2099.4
NC_011353:2957962:2973250297325029742541005Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage replication protein O4e-2098.6
NC_013008:2910567:2928121292812129291401020Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O4e-2098.6
NC_013941:699286:7055757055757065941020Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O4e-2098.6
NC_011751:643976:6532266532266542451020Escherichia coli UMN026 chromosome, complete genomereplication protein O frm phage origin1e-1997.4
NC_011415:600375:618276618276619205930Escherichia coli SE11 chromosome, complete genomeputative phage replication protein1e-1997.1
NC_011740:2769961:2784994278499427860131020Escherichia fergusonii ATCC 35469, complete genomeReplication protein O frm phage origin3e-1995.9
NC_011748:824367:8289848289848300031020Escherichia coli 55989, complete genomeReplication protein O frm phage origin3e-1995.5
CU928145:824367:8289848289848300031020Escherichia coli 55989 chromosome, complete genomeReplication protein O frm phage origin3e-1995.5
NC_017046:2756000:276522027652202766104885Salmonella enterica subsp. enterica serovar Typhimurium str. 798Gifsy-2 replication Protein O5e-1995.1
NC_016856:2812905:281968928196892820573885Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage replication protein O5e-1995.1
NC_011080:2761403:276818727681872769071885Salmonella enterica subsp. enterica serovar Newport str. SL254,replication protein O5e-1995.1
NC_011283:4212000:421922242192224220076855Klebsiella pneumoniae 342 chromosome, complete genomephage replication protein O3e-1892.4
NC_020063:2565605:258198225819822582881900Enterobacteriaceae bacterium strain FGI 57, complete genomephage replication protein O3e-1582.4
NC_014121:3627588:366881636688163669715900Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeDNA replication protein gp183e-1375.9
NC_007645:605500:606779606779607768990Hahella chejuensis KCTC 2396, complete genomephage replication protein O3e-1375.5
NC_016514:2476359:251218525121852513135951Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YfdO1e-0757
NC_012751:942315:978497978497979402906Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage replication protein2e-0756.2
NC_017986:4885979:490779249077924908613822Pseudomonas putida ND6 chromosome, complete genomephage replication protein3e-0756.2
NC_005140:960261:9622179622179632601044Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein4e-0652