Pre_GI: BLASTP Hits

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Query: NC_006905:368942:380710 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 380710, End: 380898, Length: 189

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:134216213421621342383222Salmonella enterica subsp. enterica serovar Paratyphi C strainbacteriophage ST104 protein Kil7e-31132
NC_016860:364981:374059374059374247189Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage ST104 protein Kil1e-30131
NC_011147:2496808:251640525164052516593189Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-29127
NC_006511:2501500:252086925208692521057189Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-29127
NC_011083:374000:382871382871383059189Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-2097.8