Pre_GI: BLASTP Hits

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Query: NC_006905:2960260:2980283 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2980283, End: 2981314, Length: 1032

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2867766:2888679288867928897101032Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island 1 effector protein0661
NC_003197:3005842:3026755302675530277861032Salmonella typhimurium LT2, complete genometranslocation machinery component0661
NC_016810:3028421:3049331304933130503621032Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 effector protein0661
NC_016856:3026426:3046992304699230480231032Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranslocation machinery component0661
NC_016857:3028421:3049331304933130503621032Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74translocation machinery component0661
NC_016860:3029272:3050185305018530512161032Salmonella enterica subsp. enterica serovar Typhimurium strtranslocation machinery component0661
NC_016863:2974333:2995245299524529962761032Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1translocation machinery component0661
NC_017046:3027161:3048071304807130491021032Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island 1 effector protein0661
NC_012125:2938519:2960666296066629616971032Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein0661
NC_011294:2890500:2911415291141529124461032Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island 1 effector protein0661
NC_011274:2881306:2902219290221929032501032Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island 1 effector protein0661
NC_011205:3050235:3071152307115230721831032Salmonella enterica subsp. enterica serovar Dublin str. CT_020218530661
NC_011080:2982346:3003259300325930042901032Salmonella enterica subsp. enterica serovar Newport str. SL254,0661
NC_011149:2912219:2935281293528129363121032Salmonella enterica subsp. enterica serovar Agona str. SL483,type III effector protein IpaD/SipD/SspD0656
NC_010102:2967464:298973729897372990672936Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-170597
NC_011094:2913500:2933960293396029349821023Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III effector protein IpaD/SipD/SspD2e-166585
NC_004631:2842453:2864622286462228656441023Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity island 1 effector protein2e-164578
NC_006511:2819128:2841301284130128423231023Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity island 1 effector protein2e-164578
NC_003198:2856596:2878765287876528797871023Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity island 1 effector protein2e-164578
NC_011147:2814664:2836837283683728378591023Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein2e-164578
NC_016832:2829767:2851921285192128529431023Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cell invasion protein sipD3e-163574
NC_015761:2726000:2746363274636327473851023Salmonella bongori NCTC 12419, complete genomepathogenicity island 1 effector protein1e-161569
NC_010067:84093:8720487204882261023Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-152537
NC_010660:86445:104361104361105359999Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceinvasin protein IpaD8e-49194
NC_011751:4293966:4305115430511543064641350Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-22107
NC_011750:4390000:4423335442333544246841350Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-22107
NC_013722:1689125:1703391170339117052711881Xanthomonas albilineans, complete genomeputative xsa-invasion protein2e-1273.6
NC_013971:2876733:2890694289069428918181125Erwinia amylovora ATCC 49946 chromosome, complete genometype III effector protein5e-1272
NC_013961:851044:8794828794828806061125Erwinia amylovora, complete genomeCell invasion protein sipD5e-1272
NC_010694:2971170:2984655298465529858151161Erwinia tasmaniensis, complete genomePutative invasin-like protein (36 kDa membrane antigen)3e-1169.7
NC_012214:2221702:2235822223582222369731152Erwinia pyrifoliae Ep1/96, complete genomePutative invasin-like protein SipD8e-1064.7
NC_010694:2138000:2148360214836021494541095Erwinia tasmaniensis, complete genomePathogenicity island effector protein7e-0858.5