Pre_GI: BLASTP Hits

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Query: NC_006905:2805877:2823896 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2823896, End: 2824633, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2789744:280918428091842809921738Salmonella enterica subsp. enterica serovar Newport str. SL254,outer membrane assembly lipoprotein YfiO2e-142504
NC_011149:2701916:272009427200942720831738Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane assembly lipoprotein YfiO2e-142504
NC_003198:2703013:272253927225392723276738Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein8e-142502
CP002516:1196000:119804211980421198779738Escherichia coli KO11, complete genomeouter membrane assembly lipoprotein YfiO4e-138490
CP002185:2889656:290707829070782907815738Escherichia coli W, complete genomepredicted lipoprotein4e-138490
CU928160:2785792:280321228032122803949738Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein4e-138490
NC_013850:1198134:120015612001561200893738Klebsiella variicola At-22 chromosome, complete genomeouter membrane assembly lipoprotein YfiO2e-133475
NC_009648:3192483:320942632094263210163738Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeouter membrane protein assembly complex subunit YfiO2e-133474
NC_012917:3565268:356526835652683566002735Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeouter membrane assembly lipoprotein YfiO2e-109395
NC_011184:597496:599583599583600308726Vibrio fischeri MJ11 chromosome I, complete sequencecompetence lipoprotein ComL2e-72271
NC_010995:3821327:382394738239473824930984Cellvibrio japonicus Ueda107, complete genomecompetence protein ComL6e-47187
NC_015556:4118304:411942641194264120415990Pseudomonas fulva 12-X chromosome, complete genomeouter membrane assembly lipoprotein YfiO6e-46184
NC_008260:497855:516462516462517280819Alcanivorax borkumensis SK2, complete genomecompetence lipoprotein ComL, putative2e-45182
NC_009439:1075170:109303510930351094027993Pseudomonas mendocina ymp, complete genomeDNA uptake lipoprotein-like protein3e-45181
NC_015410:1144272:116107011610701162062993Pseudomonas mendocina NK-01 chromosome, complete genomeDNA uptake lipoprotein-like protein4e-45181
NC_018080:5192264:5193372519337251943971026Pseudomonas aeruginosa DK2 chromosome, complete genomecompetence protein ComL1e-43176
NC_008463:5364428:5364428536442853654531026Pseudomonas aeruginosa UCBPP-PA14, complete genomecompetence lipoprotein ComL1e-43176
NC_016002:1975000:202347820234782024269792Pseudogulbenkiania sp. NH8B, complete genomecompetence lipoprotein ComL7e-43174
NC_007645:6049340:605120960512096052036828Hahella chejuensis KCTC 2396, complete genomeDNA uptake lipoprotein8e-43173
NC_008740:979830:997325997325998158834Marinobacter aquaeolei VT8, complete genomeDNA uptake lipoprotein2e-42172
NC_003112:719490:734869734869735672804Neisseria meningitidis MC58, complete genomecompetence lipoprotein ComL2e-42172
NC_003116:867943:883784883784884587804Neisseria meningitidis Z2491, complete genomecompetence lipoprotein3e-41168
NC_013016:633313:646352646352647155804Neisseria meningitidis alpha14 chromosome, complete genomeDNA uptake lipoprotein3e-41168
NC_017501:1633436:163852816385281639331804Neisseria meningitidis 8013, complete genomecompetence lipoprotein ComL3e-41168
NC_017505:721395:737795737795738598804Neisseria meningitidis alpha710 chromosome, complete genomecompetence lipoprotein3e-41168
NC_017512:642229:654633654633655436804Neisseria meningitidis WUE 2594, complete genomecompetence lipoprotein ComL3e-41168
NC_017514:1520245:152246815224681523271804Neisseria meningitidis M01-240149 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_017518:795113:811512811512812315804Neisseria meningitidis NZ-05/33 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_017515:1555500:155776215577621558565804Neisseria meningitidis M04-240196 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_010120:662969:676317676317677120804Neisseria meningitidis 053442, complete genomecompetence lipoprotein3e-41168
NC_017517:749031:766249766249767052804Neisseria meningitidis M01-240355 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_007484:755058:774396774396775181786Nitrosococcus oceani ATCC 19707, complete genomeprobable transmembrane protein1e-40166
NC_008781:1973826:198790219879021988726825Polaromonas naphthalenivorans CJ2, complete genomeputative transmembrane protein2e-32139
NC_004344:589375:615964615964616644681Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1789
NC_007940:1178000:119200511920051192766762Rickettsia bellii RML369-C, complete genomeDNA uptake lipoprotein7e-1787.8
NC_009883:343067:349375349375350136762Rickettsia bellii OSU 85-389, complete genomeDNA uptake lipoprotein7e-1787.8
NC_013173:1231213:124487112448711245584714Desulfomicrobium baculatum DSM 4028, complete genomeouter membrane assembly lipoprotein YfiO5e-1684.7
NC_011296:801612:808364808364809110747Thermodesulfovibrio yellowstonii DSM 11347, complete genometetratricopeptide repeat domain protein2e-1479.3
NC_015681:1201926:121829812182981219038741Thermodesulfatator indicus DSM 15286 chromosome, complete genomeouter membrane assembly lipoprotein YfiO8e-1477.4
NC_003103:225956:240210240210240965756Rickettsia conorii str. Malish 7, complete genomehypothetical protein1e-1376.6
NC_013501:777947:777947777947778789843Rhodothermus marinus DSM 4252, complete genomeouter membrane assembly lipoprotein YfiO3e-1375.5
NC_012730:332500:338861338861339616756Rickettsia peacockii str. Rustic, complete genomeComL family lipoprotein5e-1374.7
NC_020300:1041523:104545110454511046344894Bartonella australis Aust/NH1, complete genomecompetence lipoprotein comL precursor5e-1374.7
NC_016930:228000:241908241908242663756Rickettsia philipii str. 364D chromosome, complete genomeComL family lipoprotein7e-1374.3
NC_010263:232482:243972243972244727756Rickettsia rickettsii str. Iowa, complete genomelipoprotein, ComL family1e-1273.6
NC_009882:232400:243878243878244633756Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein1e-1273.6
NC_016909:230000:243832243832244587756Rickettsia rickettsii str. Arizona chromosome, complete genomeComL family lipoprotein1e-1273.6
NC_016911:232481:243920243920244675756Rickettsia rickettsii str. Hauke chromosome, complete genomeComL family lipoprotein1e-1273.6
NC_016913:917500:924387924387925142756Rickettsia rickettsii str. Brazil chromosome, complete genomeComL family lipoprotein1e-1273.6
NC_016914:231324:244059244059244814756Rickettsia rickettsii str. Hino chromosome, complete genomeComL family lipoprotein1e-1273.6
NC_014932:1084422:109394610939461094866921Bartonella clarridgeiae 73, complete genomecompetence lipoprotein precursor3e-1272.4
NC_020409:329915:339507339507340235729Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOuter membrane assembly lipoprotein YfiO4e-1271.6
NC_012846:1551000:155494615549461555839894Bartonella grahamii as4aup, complete genomecompetence lipoprotein ComL precursor7e-1270.9
NC_009881:236500:248071248071248814744Rickettsia akari str. Hartford, complete genomehypothetical protein1e-1170.1
NC_000963:205546:220202220202220957756Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein2e-1169.3
NC_017049:203748:218402218402219157756Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein2e-1169.3
NC_017050:205547:220203220203220958756Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein2e-1169.3
NC_017051:203752:218406218406219161756Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein2e-1169.3
NC_017056:205558:220211220211220966756Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein2e-1169.3
NC_017048:547712:562367562367563122756Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein2e-1169.3
NC_017057:205771:220426220426221181756Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein2e-1169.3
NC_020301:1132927:113684711368471137743897Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomecompetence lipoprotein comL precursor2e-1169.3
NC_005956:1221352:122994812299481230841894Bartonella henselae str. Houston-1, complete genomeCompetence lipoprotein comL precursor5e-1168.2
NC_017042:310000:324732324732325487756Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeDNA uptake lipoprotein5e-1168.2
NC_005955:1029435:103339210333921034285894Bartonella quintana str. Toulouse, complete genomeCompetence lipoprotein comL precursor8e-1167.4
NC_009900:231983:246219246219246974756Rickettsia massiliae MTU5, complete genomeDNA uptake lipoprotein1e-1067
NC_016931:232981:244446244446245201756Rickettsia massiliae str. AZT80 chromosome, complete genomeDNA uptake lipoprotein2e-1066.2
NC_016050:236000:247216247216247971756Rickettsia japonica YH, complete genomehypothetical protein2e-1065.9
NC_015866:233448:246160246160246915756Rickettsia heilongjiangensis 054 chromosome, complete genomeDNA uptake lipoprotein2e-1065.9
NC_017028:316000:327173327173327928756Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeDNA uptake lipoprotein3e-1065.5
NC_017058:1200500:120659012065901207333744Rickettsia australis str. Cutlack chromosome, complete genomehypothetical protein1e-0963.5
NC_009879:200419:206730206730207473744Rickettsia canadensis str. McKiel, complete genomehypothetical protein2e-0962.8
NC_016929:197403:207721207721208464744Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein2e-0962.8