Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1534629 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1534629, End: 1535060, Length: 432

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1429516:145516214551621455539378Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein1e-47187
NC_003197:1471349:149699514969951497372378Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein1e-47187
NC_011080:1470794:149643514964351496812378Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system apparatus SsaO1e-47187
NC_011149:1710601:171861217186121718989378Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus SsaO1e-47187
NC_006511:1506915:151492615149261515303378Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein1e-47187
NC_011147:1502096:151010715101071510484378Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein1e-47187
NC_011274:1763676:177168717716871772064378Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein1e-47187
NC_012125:2360815:236882623688262369203378Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein1e-47187
NC_016856:1481325:150697115069711507348378Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein1e-47187
NC_016860:1469066:149468214946821495059378Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system apparatus protein SsaO1e-47187
NC_016831:1236786:126236812623681262745378Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein4e-47186
NC_011205:1852665:186067618606761861053378Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus SsaO7e-47185
NC_011294:1723852:173186317318631732240378Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein6e-47185
NC_003198:1621347:162935816293581629735378Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein1e-46184
NC_010102:1616530:162454116245411624909369Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-46181
NC_011094:1435347:146090814609081461276369Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaO2e-45180
NC_010067:1507823:151941115194111519794384Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-39160