Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1529917 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1529917, End: 1530933, Length: 1017

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1428272:1449152144915214501681017Salmonella enterica subsp. enterica serovar Typhimurium str. 798secretion system protein7e-164576
NC_016863:1429516:1450396145039614514121017Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein7e-164576
NC_016857:1428201:1449081144908114500971017Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III secretion system apparatus protein7e-164576
NC_016856:1481325:1502205150220515032211017Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein7e-164576
NC_016810:1428201:1449081144908114500971017Salmonella enterica subsp. enterica serovar Typhimurium strputative secretion system protein7e-164576
NC_003197:1471349:1492229149222914932451017Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein7e-164576
NC_011294:1723852:1735990173599017370061017Salmonella enterica subsp. enterica serovar Enteritidis strsecretion system protein9e-163572
NC_011274:1763676:1775814177581417768301017Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91secretion system protein9e-163572
NC_011149:1710601:172273917227391723731993Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus protein SsaL6e-160563
NC_016860:1469066:148994014899401490932993Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein3e-159561
NC_011094:1435347:145615714561571457149993Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaL7e-159560
NC_016831:1236786:125762612576261258618993Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative secretion system protein4e-158557
NC_011205:1852665:186480318648031865795993Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus protein SsaL4e-158557
NC_011080:1470794:149169314916931492685993Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system apparatus protein SsaL4e-158557
NC_011147:1502096:151423415142341515226993Salmonella enterica subsp. enterica serovar Paratyphi A strsecretion system protein6e-158556
NC_006511:1506915:151905315190531520045993Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secretion system protein6e-158556
NC_003198:1621347:163348516334851634477993Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secretion system protein4e-155547
NC_004631:1325817:134665913466591347651993Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secretion system protein4e-155547
NC_016832:1324820:134563213456321346624993Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus protein ssaL4e-155547
NC_012125:2360815:237295323729532373918966Salmonella enterica subsp. enterica serovar Paratyphi C strainsecretion system protein1e-154546
NC_011083:1476894:149779514977951498760966Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system apparatus protein SsaL5e-154543
NC_010102:1616530:162866816286681629633966Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-152539
NC_010067:1507823:152353815235381524530993Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-146518
NC_005085:2774370:2789646278964627907521107Chromobacterium violaceum ATCC 12472, complete genomeSecretion system apparatus6e-1375.1
NC_013364:3701895:3725324372532437263791056Escherichia coli O111:H- str. 11128, complete genomesecretion switching protein SepL3e-1169.7
NC_002655:4653160:4662759466275946638141056Escherichia coli O157:H7 EDL933, complete genomesepL7e-1168.6
NC_002695:4584177:4593776459377645948311056Escherichia coli O157:H7 str. Sakai, complete genomeSepL7e-1168.6
NC_011353:4688000:4696880469688046979351056Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein SepL7e-1168.6
NC_013008:4643825:4652921465292146539761056Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component7e-1168.6
NC_013941:4470932:4481286448128644823411056Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSepL7e-1168.6
NC_012779:916000:9296209296209306451026Edwardsiella ictaluri 93-146, complete genomeEsaL, putative3e-1066.2
NC_013361:5319497:5359062535906253601171056Escherichia coli O26:H11 str. 11368 chromosome, complete genomesecretion switching protein SepL4e-1065.9
NC_011601:4096427:4107708410770841087631056Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomesecretion switching protein SpeL5e-1065.9
NC_013353:3669500:3683683368368336847381056Escherichia coli O103:H2 str. 12009, complete genomesecretion switching protein SepL5e-1065.5
AP010958:3669500:3683683368368336847381056Escherichia coli O103:H2 str. 12009 DNA, complete genomesecretion switching protein SepL5e-1065.5
NC_014012:2565329:2569813256981325708411029Shewanella violacea DSS12, complete genomesecretion system apparatus protein ssaL, putative2e-0860.5