Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1528732 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1528732, End: 1529280, Length: 549

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:237460623746062375154549Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein1e-81301
NC_011083:1476894:149655914965591497107549Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein1e-81301
NC_010102:1616530:163032116303211630869549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-81301
NC_011080:1470794:149048414904841491032549Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein1e-81301
NC_003197:1471349:149104414910441491592549Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-80298
NC_006511:1506915:152070615207061521254549Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-80298
NC_011147:1502096:151588715158871516435549Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-80298
NC_011294:1723852:173764317376431738191549Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein1e-80298
NC_016810:1428201:144789614478961448444549Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein1e-80298
NC_016831:1236786:125641712564171256965549Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein1e-80298
NC_016856:1481325:150102015010201501568549Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-80298
NC_016857:1428201:144789614478961448444549Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-80298
NC_016863:1429516:144921114492111449759549Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-80298
NC_017046:1428272:144796714479671448515549Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein1e-80298
NC_011274:1763676:177746717774671778015549Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein2e-80297
NC_004631:1325817:134545013454501345998549Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein4e-80296
NC_003198:1621347:163513816351381635686549Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein4e-80296
NC_016832:1324820:134442313444231344971549Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus4e-80296
NC_016860:1469066:148873114887311489279549Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein4e-80296
NC_010067:1507823:152519115251911525520330Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-41169
NC_011205:1852665:186645618664561866728273Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus4e-33140
NC_011149:1710601:172439217243921724664273Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus4e-33140
NC_011094:1435347:145522414552241455496273Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus2e-32138