Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1525213 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1525213, End: 1525647, Length: 435

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:1616530:163395416339541634388435Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-81300
NC_010067:1507823:152884815288481529276429Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-77285
NC_011294:1723852:174127617412761741710435Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein1e-81300
NC_012125:2360815:237823923782392378673435Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein1e-81300
NC_011274:1763676:178110017811001781534435Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein1e-81300
NC_011147:1502096:151952015195201519948429Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-79294
NC_004631:1325817:134193113419311342365435Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein6e-81298
NC_003198:1621347:163877116387711639205435Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein6e-81298
NC_006511:1506915:152433915243391524767429Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-79294
NC_016831:1236786:125290412529041253332429Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein2e-80296
NC_015470:831863:845970845970846488519Chlamydophila psittaci 6BC chromosome, complete genomeputative type III secretion chaperone low calcium response protein2e-0650.8
NC_017289:834781:846503846503847021519Chlamydophila psittaci 01DC11 chromosome, complete genomeputative type III secretion chaperone low calcium response protein2e-0650.8
NC_017291:829577:843684843684844202519Chlamydophila psittaci C19/98 chromosome, complete genomeputative type III secretion chaperone low calcium response protein2e-0650.8
NC_017292:834749:846471846471846989519Chlamydophila psittaci 02DC15 chromosome, complete genomeputative type III secretion chaperone low calcium response protein2e-0650.8
NC_003197:1471349:148752514875251487959435Salmonella typhimurium LT2, complete genomesecretion system chaparone1e-81300
NC_016857:1428201:144437714443771444811435Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system chaperone1e-81300
NC_016863:1429516:144569214456921446126435Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system chaperone1e-81300
NC_016856:1481325:149750114975011497935435Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system chaperone1e-81300
NC_014012:2565329:257645225764522577006555Shewanella violacea DSS12, complete genometype III secretion chaperone, putative1e-1168.9
NC_011083:1476894:149304614930461493474429Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion low calcium response chaperone LcrH/SycD2e-80296
NC_016860:1469066:148521214852121485646435Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion low calcium response chaperone LcrH/SycD1e-81300
NC_011080:1470794:148696514869651487399435Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion low calcium response chaperone LcrH/SycD1e-81300
NC_011094:1435347:145143614514361451864429Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion low calcium response chaperone LcrH/SycD2e-80296
NC_011149:1710601:172802517280251728459435Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion low calcium response chaperone LcrH/SycD1e-81300
NC_016832:1324820:134090413409041341338435Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion low calcium response chaperone LcrH/SycD6e-81298
NC_011205:1852665:187008918700891870517429Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion low calcium response chaperone LcrH/SycD2e-80296
NC_016810:1428201:144437714443771444811435Salmonella enterica subsp. enterica serovar Typhimurium strType III secretion system chaperone protein1e-81300
NC_017046:1428272:144444814444481444882435Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system chaperone protein1e-81300