Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1522209 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1522209, End: 1522682, Length: 474

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:238120423812042381677474Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion system chaperone protein2e-89327
NC_016857:1428201:144133114413311441846516Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III secretion low calcium response chaperone LcrH/SycD7e-89325
NC_003197:1471349:148452114845211484994474Salmonella typhimurium LT2, complete genomesecretion system chaparone9e-89325
NC_016810:1428201:144137314413731441846474Salmonella enterica subsp. enterica serovar Typhimurium strType III secretion system chaperone protein9e-89325
NC_016856:1481325:149449714944971494970474Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system chaperone9e-89325
NC_016860:1469066:148220814822081482681474Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system chaperone9e-89325
NC_016863:1429516:144268814426881443161474Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system chaperone9e-89325
NC_017046:1428272:144144414414441441917474Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system chaperone protein9e-89325
NC_011149:1710601:173099017309901731463474Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion low calcium response chaperone LcrH/SycD9e-89325
NC_004631:1325817:133892713389271339400474Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative type III secretion system chaperone protein2e-88323
NC_003198:1621347:164173616417361642209474Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative Type III secretion system chaperone protein2e-88323
NC_006511:1506915:152730415273041527777474Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative Type III secretion system chaperone protein2e-88323
NC_011147:1502096:152248515224851522958474Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion system chaperone protein2e-88323
NC_016832:1324820:133790013379001338373474Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion low calcium response chaperone LcrH/SycD2e-88323
NC_011094:1435347:144838414483841448899516Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion low calcium response chaperone LcrH/SycD3e-88323
NC_011294:1723852:174424117442411744714474Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion system chaperone protein5e-88322
NC_011274:1763676:178406517840651784538474Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion system chaperone protein5e-88322
NC_011080:1470794:148391914839191484434516Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion low calcium response chaperone LcrH/SycD1e-87321
NC_011083:1476894:148999414899941490509516Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion low calcium response chaperone LcrH/SycD4e-87319
NC_011205:1852665:187305418730541873569516Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion low calcium response chaperone LcrH/SycD4e-87319
NC_010067:1507823:153181215318121532285474Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-81301
NC_016831:1236786:124993312499331250367435Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type III secretion system chaperone protein1e-79294
NC_010102:1616530:163691916369191637353435Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-79293
NC_014012:2565329:258188125818812582354474Shewanella violacea DSS12, complete genometype III secretion system chaperone, SycD family2e-22104
NC_005085:2774370:278236627823662782851486Chromobacterium violaceum ATCC 12472, complete genometype III secretion system CesD protein1e-21102
AP010958:3669500:370283237028323703287456Escherichia coli O103:H2 str. 12009 DNA, complete genomechaperone CesD1e-1065.9
NC_013353:3669500:370283237028323703287456Escherichia coli O103:H2 str. 12009, complete genomechaperone CesD1e-1065.9
NC_013361:5319497:534059353405935341048456Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS chaperone CesD1e-1065.9
NC_012962:1189021:120659012065901207099510Photorhabdus asymbiotica, complete genomeyopb/d chaperone sycd5e-0960.1
NC_013941:4470932:450043245004324500887456Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype III secretion low calcium response chaperone LcrH/SycD4e-0857.4
NC_013364:3701895:374433437443343744789456Escherichia coli O111:H- str. 11128, complete genomechaperone CesD4e-0857.4
NC_013008:4643825:467207346720734672528456Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor4e-0857.4
NC_011601:4096427:412669341266934127148456Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomechaperone CesD4e-0857.4
NC_002655:4653160:468191146819114682366456Escherichia coli O157:H7 EDL933, complete genomecesD4e-0857.4
NC_002695:4584177:461292846129284613383456Escherichia coli O157:H7 str. Sakai, complete genomeCesD4e-0857.4
NC_005126:4423964:442746244274624427965504Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5