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Query: NC_006905:1509093:1520838 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1520838, End: 1521080, Length: 243

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:238280023828002383042243Salmonella enterica subsp. enterica serovar Paratyphi C strainsecretion system protein1e-38158
NC_003197:1471349:148309514830951483337243Salmonella typhimurium LT2, complete genomesecretion system effector1e-37155
NC_011294:1723852:174583717458371746079243Salmonella enterica subsp. enterica serovar Enteritidis strsecretion system protein1e-37155
NC_016810:1428201:143994714399471440189243Salmonella enterica subsp. enterica serovar Typhimurium strtype three secretion system protein1e-37155
NC_016856:1481325:149307114930711493313243Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system effector1e-37155
NC_016857:1428201:143994714399471440189243Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system effector1e-37155
NC_016860:1469066:148078214807821481024243Salmonella enterica subsp. enterica serovar Typhimurium strputative secretion system protein1e-37155
NC_016863:1429516:144126214412621441504243Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system effector1e-37155
NC_004631:1325817:133756213375621337804243Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secretion system protein6e-38155
NC_011149:1710601:173264617326461732888243Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion system protein, YseE family6e-38155
NC_003198:1621347:164333216433321643574243Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secretion system protein6e-38155
NC_011094:1435347:144706214470621447304243Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion system protein, YseE family protein6e-38155
NC_016832:1324820:133653513365351336777243Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion system protein, YseE6e-38155
NC_006511:1506915:152896015289601529202243Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secretion system protein4e-37153
NC_011147:1502096:152414115241411524383243Salmonella enterica subsp. enterica serovar Paratyphi A strsecretion system protein4e-37153
NC_011083:1476894:148861014886101488852243Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion system protein, YseE family3e-37153
NC_011274:1763676:178566117856611785903243Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91secretion system protein6e-37152
NC_011205:1852665:187465018746501874883234Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853YseE family type III secretion system protein2e-35147
NC_011080:1470794:148254514825451482778234Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion system protein, YseE family2e-35147
NC_016831:1236786:124853812485381248771234Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative secretion system protein8e-35145
NC_010067:1507823:153327415332741533537264Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-33138
NC_017046:1428272:144004514400451440260216Salmonella enterica subsp. enterica serovar Typhimurium str. 798type three secretion system protein4e-32136
NC_010102:1616530:163857616385761638791216Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-32136