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Query: NC_006905:1509093:1517742 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1517742, End: 1518143, Length: 402

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1429516:143816614381661438567402Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein9e-66248
NC_016857:1428201:143685114368511437252402Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein9e-66248
NC_016856:1481325:148997514899751490376402Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein9e-66248
NC_016810:1428201:143685114368511437252402Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island 2 secreted effector protein9e-66248
NC_003197:1471349:147999914799991480400402Salmonella typhimurium LT2, complete genomesecreted effector protein9e-66248
NC_006511:1506915:153189715318971532298402Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island secreted effector protein2e-65247
NC_011147:1502096:152707815270781527479402Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island secreted effector protein2e-65247
NC_011274:1763676:178859817885981788999402Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island 2 effector protein2e-65247
NC_011294:1723852:174877417487741749175402Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island 2 secreted effector protein1e-64244
NC_012125:2360815:238573723857372386120384Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein2e-62236
NC_016860:1469066:147770414777041478087384Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein7e-62235
NC_004631:1325817:133448413344841334867384Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island secreted effector protein7e-62235
NC_010102:1616530:164151316415131641896384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-61234