Pre_GI: BLASTP Hits

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Query: NC_006905:1342474:1350920 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1350920, End: 1351990, Length: 1071

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015963:117178:144460144460145440981Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceparB-like partition protein9e-79293
NC_009649:94871:113605113605114576972Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,plasmid-partitioning protein2e-76286
NC_006856:95830:114503114503115474972Salmonella enterica subsp. enterica serovar Choleraesuis strSopB2e-76286
NC_009425:63709:804748047481442969Enterobacter sp. 638 plasmid pENTE01, complete sequenceplasmid-partitioning protein2e-76286
NC_010488:48868:536645366454635972Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceplasmid partition protein SopB1e-74280
NC_011747:11532:295562955630527972Escherichia coli S88 plasmid pECOS88, complete sequenceplasmid-partitioning protein1e-74280
NC_008739:41793:4831748317494651149Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequenceparB-like partition protein5e-1892.4
NC_008118:56777:911809118092151972Yersinia pestis Nepal516 plasmid pMT, complete sequencepartitioning protein B5e-0962.4
NC_003134:64672:679886798868959972Yersinia pestis CO92 plasmid pMT1, complete sequencepartitioning protein B5e-0962.4
NC_010158:92819:104832104832105803972Yersinia pestis Angola plasmid pMT-pPCP, complete sequence5e-0962.4
NC_005815:61148:927139271393684972Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative partitioning protein B5e-0962.4
NC_008120:62000:867358673587706972Yersinia pestis Antiqua plasmid pMT, complete sequencepartitioning protein B5e-0962.4
NC_004838:51013:630386303864009972Yersinia pestis KIM plasmid pMT-1, complete sequencepartitioning protein5e-0962.4
NC_009378:106193:127272127272128243972Yersinia pestis Pestoides F plasmid MT, complete sequencepartitioning protein B5e-0962.4
NC_014839:253961:253961253961254950990Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceparB-like partition protein9e-0961.6
NC_014305:97055:101670101670102647978Erwinia billingiae Eb661 plasmid pEB170, complete sequencePlasmid partitioning protein B4e-0859.3
NC_010660:86445:101065101065101994930Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencevirulence regulon transcriptional activator VirB1e-0757.8
NC_014841:41773:539965399654979984Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceparB-like partition protein2e-0757
NC_015594:332432:332432332432333424993Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeparB-like partition protein4e-0755.8
NC_014561:153143:161048161048162019972Pantoea vagans C9-1 plasmid pPag1, complete sequenceChromosome-partitioning protein parB8e-0651.6