Pre_GI: BLASTP Hits

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Query: NC_006856:95830:117380 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 117380, End: 118390, Length: 1011

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009649:94871:1106771106771116871011Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,DNA replication3e-180630
NC_006625:111000:1281301281301291401011Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceDNA replication protein2e-179628
NC_015963:117178:1415271415271425371011Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceinitiator RepB protein2e-168591
NC_007941:11319:454564545646433978Escherichia coli UTI89 plasmid pUTI89, complete sequencereplication protein RepFIB (P307 replicon)6e-98357
NC_016860:4024000:403228440322844033261978Salmonella enterica subsp. enterica serovar Typhimurium strreplication protein A6e-98357
NC_009837:155284:159180159180160157978Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein6e-98357
NC_010488:48868:690786907870055978Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequencerepFIB replication protein A6e-98357
NC_014561:153143:1655761655761666491074Pantoea vagans C9-1 plasmid pPag1, complete sequenceReplication protein repA8e-98357
NC_016819:1:6252625273011050Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq202,Initiator Replication protein4e-96351
NC_014840:205723:2114342114342125161083Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceinitiator RepB protein7e-95347
NC_013956:4627890:463285846328584633787930Pantoea ananatis LMG 20103 chromosome, complete genomeRepA3e-94345
NC_014841:41773:5040750407514261020Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceinitiator RepB protein3e-87322
NC_014305:97055:1047931047931058121020Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA initiation replication protein4e-85315
NC_009425:63709:779087790878768861Enterobacter sp. 638 plasmid pENTE01, complete sequenceinitiator RepB protein7e-63241
NC_006625:144929:146911146911147795885Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencereplication initiation protein2e-52206
NC_013285:1:265526553347693Cronobacter turicensis plasmid pCTU3, complete sequenceRepFIB replication protein A4e-48192
NC_013285:1:247324732658186Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein9e-1271.2