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Query: NC_006576:2610565 Synechococcus elongatus PCC 6301, complete genome

Start: 2610565, End: 2634819, Length: 24255

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007604:1512709*1512709153759924891Synechococcus elongatus PCC 7942, complete genome043390BLASTN svgBLASTP svg
NC_003272:25603292560329258040420076Nostoc sp. PCC 7120, complete genome1e-42182BLASTN svgBLASTP svg
NC_007516:731193*73119375875727565Synechococcus sp. CC9605, complete genome4e-27131BLASTN svgBLASTP svg
NC_007604:2555000*2555000257788622887Synechococcus elongatus PCC 7942, complete genome9e-22113BLASTN svgBLASTP svg
NC_006576:1743500*1743500176608122582Synechococcus elongatus PCC 6301, complete genome9e-22113BLASTN svgBLASTP svg
NC_007513:1900000*1900000192383823839Synechococcus sp. CC9902, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_019745:37780173778017379609918083Gloeocapsa sp. PCC 7428, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008319:1376938*1376938140097624039Synechococcus sp. CC9311, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007516:1439537*1439537147374534209Synechococcus sp. CC9605, complete genome3e-0661.9BLASTN svgBLASTP svg